Ajvree Week 11 - Revision history

Ajvree: added team template

2013-11-18T18:14:35Z

added team template

2013-11-12T07:42:27Z

added journal club presentation

2013-11-12T05:10:36Z

link to user page

2013-11-12T05:05:55Z

‎Results of Experiment

2013-11-12T05:00:26Z

‎Results of Experiment: additional results

2013-11-12T04:53:44Z

‎Results of Experiment: added some result/discussion points

2013-11-12T04:45:55Z

‎Introduction

2013-11-12T04:44:58Z

‎MOD: SpR6: finished mod questions

2013-11-12T04:43:27Z

‎MOD: SpR6: appearance, etc, for mod

2013-11-12T04:36:09Z

‎MOD: SpR6: began mod info

← Older revision		Revision as of 07:42, 12 November 2013
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	R6 and G54 strains were found using alternate names: R6: ATCC BAA-255, G54: serotype 19F		R6 and G54 strains were found using alternate names: R6: ATCC BAA-255, G54: serotype 19F
		+
		+	==Group Presentation==
		+	[[Media:TeamATK.pdf\|Team Journal Club Presentation]]

	===Individual Assignment===		===Individual Assignment===

@@ Line 80: / Line 80: @@
 *suggested that insertion of IS elements may ultimately affect BOX and RUP ratios in the 3'-3' and 5'-5' ends on opposite chromosomes
 *did not find an expected IS1202 element in R6 strain that was found in parent D39 strain
-*found all expected induced genes for competence that was noted by reference 'Lee and Morrison'
+*found all expected induced genes for competence that was noted by reference Lee and Morrison
 ==MOD: SpR6==

@@ Line 74: / Line 74: @@
 *Figure 2:
 **compares R6 sequences with those of other organisms
 *Table 4:
 **looks at percentages of genes positioned certain ways next to repetitive BOX and RUP elements
@@ Line 79: / Line 80: @@
 *suggested that insertion of IS elements may ultimately affect BOX and RUP ratios in the 3'-3' and 5'-5' ends on opposite chromosomes
 *did not find an expected IS1202 element in R6 strain that was found in parent D39 strain
 ==MOD: SpR6==

@@ Line 24: / Line 24: @@
 *S. pneumoniae infection is a top cause of death in the U.S., ~1.1 million annually worldwide
 *1/3 isolates are able to resist penicillin, antibiotic resistance is increasing
-*''Streptococcus'' can be either pathogenic or commensalists, requiring a eukaryotic host
+*Streptococcus can be either pathogenic or commensalists, requiring a eukaryotic host
 *the experiment sequenced the genome of S. pneumoniae with hopes that it would help find new therapies
 *used R6 strain, a derivative of a smooth strain, used commonly in clinical and lab settings

@@ Line 102: / Line 102: @@
 **no help section or tutorial
 **when making a sample search, information was easy to follow and find, results were clearly presented
+**organized in table/column form

← Older revision		Revision as of 04:43, 12 November 2013
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	**copyright for site is 2001		**copyright for site is 2001
	**UAB information page last updated February 17, 2005		**UAB information page last updated February 17, 2005
		+	*there are links to the CDC and GenBank databases
		+	*Sequence information can be fully downloaded for free as FastA files
		+	*Appearance/User Friendliness:
		+	**Overall simplistic, visually appealing
		+	**easy to navigate, well-organized for the most part
		+	**no help section or tutorial
		+	**when making a sample search, information was easy to follow and find, results were clearly presented
		+

@@ Line 79: / Line 79: @@
 ==MOD: SpR6==
+*http://www.streppneumoniae.com
+*main links are 'analysis' and 'contact us'