Class Journal Week 5 - Revision history

Ksherbina: /* Katrina Sherbina: Response to Reflect Questions */ Answered reflection question 3.

2013-10-04T05:40:48Z

‎Katrina Sherbina: Response to Reflect Questions: Answered reflection question 3.

Ksherbina: /* Katrina Sherbina: Response to Reflect Questions */ Answered reflection question 2.

2013-10-04T05:31:30Z

‎Katrina Sherbina: Response to Reflect Questions: Answered reflection question 2.

Gleis: /* Gabriel Leis: Response to Reflect Questions */

2013-10-04T05:21:06Z

‎Gabriel Leis: Response to Reflect Questions

Ksherbina: /* Katrina Sherbina: Response to Reflect Questions */ Added answer to first reflection question.

2013-10-04T05:15:55Z

‎Katrina Sherbina: Response to Reflect Questions: Added answer to first reflection question.

Taur.vil: /* Competencies I want to know more about */ sign it

2013-10-04T05:10:59Z

‎Competencies I want to know more about: sign it

Taur.vil: /* Tauras, Lena, and Miles */ Vilgalys entry, competencies

2013-10-04T05:10:36Z

‎Tauras, Lena, and Miles: Vilgalys entry, competencies

HDelgadi: Updating third answer

2013-10-04T04:40:28Z

Updating third answer

HDelgadi: Updating answers

2013-10-04T04:37:24Z

Updating answers

Mpetredi: /* Hilda and Mitchell */ added link to protegen wiki page

2013-10-04T04:36:51Z

‎Hilda and Mitchell: added link to protegen wiki page

HDelgadi: updating answers

2013-10-04T04:19:36Z

updating answers

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 #I was familiar with the "Discovery and Acquisition of Data", "Data Analysis", "Data Visualization" and "Ethics, including citation of data" core competencies before taking this class. The first three competencies I have practiced frequently through research I have conducted both on campus with Dr. Dahlquist and Dr. Fitzpatrick and with a cancer biology lab in Boston this past summer. I became familiar with the fourth competency mentioned in previous classes I have taken with Dr. Dahlquist.
 #I gained a better understanding of the "Metadata" core competancy in that I learned what metadata is and how to make sense of it by exploring the UniProt database through this week's individual activity. Through exploring the features of the PrePPI database as well as the UniProt database this week, I gained a better understanding in the "Databases and Data Formats" core competency. In addition, I gained a greater exposure to the "Data Curation and Re-use" as well as the "Cultures of Practice" competencies in determining how the PrePPI database is curated and who is allowed to use the information in the database and for what purposes.
 ==[[User:Lena|Lena Hunt]]==

← Older revision		Revision as of 05:31, 4 October 2013
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	#I was familiar with the "Discovery and Acquisition of Data", "Data Analysis", "Data Visualization" and "Ethics, including citation of data" core competencies before taking this class. The first three competencies I have practiced frequently through research I have conducted both on campus with Dr. Dahlquist and Dr. Fitzpatrick and with a cancer biology lab in Boston this past summer. I became familiar with the fourth competency mentioned in previous classes I have taken with Dr. Dahlquist.		#I was familiar with the "Discovery and Acquisition of Data", "Data Analysis", "Data Visualization" and "Ethics, including citation of data" core competencies before taking this class. The first three competencies I have practiced frequently through research I have conducted both on campus with Dr. Dahlquist and Dr. Fitzpatrick and with a cancer biology lab in Boston this past summer. I became familiar with the fourth competency mentioned in previous classes I have taken with Dr. Dahlquist.
		+	#I gained a better understanding of the "Metadata" core competancy in that I learned what metadata is and how to make sense of it by exploring the UniProt database through this week's individual activity. Through exploring the features of the PrePPI database as well as the UniProt database this week, I gained a better understanding in the "Databases and Data Formats" core competency. In addition, I gained a greater exposure to the "Data Curation and Re-use" as well as the "Cultures of Practice" competencies in determining how the PrePPI database is curated and who is allowed to use the information in the database and for what purposes.

	==[[User:Lena\|Lena Hunt]]==		==[[User:Lena\|Lena Hunt]]==

← Older revision		Revision as of 05:21, 4 October 2013
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	===Gabriel Leis: Response to [[Week 5#Reflect\|Reflect]] Questions===		===Gabriel Leis: Response to [[Week 5#Reflect\|Reflect]] Questions===
		+	#Which of these core competencies (if any) were you familiar with before taking this class? How did you become familiar with them?
		+	#:Prior to this course I became familiar with scientific data literacy core competencies numbers 1, 2, and 12. I became familiar with these competencies through academic and scientific research and through Biochemistry lab.
		+	#Which of these core competencies (if any) did you gain a deeper understanding of by doing this exercise? What about the exercise taught you about them?
		+	#:3, 6, 7, 8, 9, 10 This exercise developed my understanding of core competencies 3, 6, 7, 8, 9, and 10. The article regarding UniProt contained a fair amount of information regarding these core competencies. Core competencies 8, 9, and 10 in particular were developed through information in the UniProt article. The group presentations were also very informative. Both the processes of preparing a presentation and listening to the presentations were informative. The presentations were particularly informative of core competencies 6 and 7.
		+	#Which of these core competencies (if any) do you want to know more about? Why?
		+	#:Data visualization and data conversion are two topics I would like to know more about. I think data visualization is an excellent way to learn and remember data in a short period of time. I have almost no knowledge of data conversion or data formats and therefore think it would be wise to learn about these competencies
		+
		+	[[User:Gleis\|Gleis]] ([[User talk:Gleis\|talk]]) 22:21, 3 October 2013 (PDT)

	===Katrina Sherbina: Response to [[Week 5#Reflect\|Reflect]] Questions===		===Katrina Sherbina: Response to [[Week 5#Reflect\|Reflect]] Questions===

← Older revision		Revision as of 05:15, 4 October 2013
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	===Katrina Sherbina: Response to [[Week 5#Reflect\|Reflect]] Questions===		===Katrina Sherbina: Response to [[Week 5#Reflect\|Reflect]] Questions===
		+
		+	#I was familiar with the "Discovery and Acquisition of Data", "Data Analysis", "Data Visualization" and "Ethics, including citation of data" core competencies before taking this class. The first three competencies I have practiced frequently through research I have conducted both on campus with Dr. Dahlquist and Dr. Fitzpatrick and with a cancer biology lab in Boston this past summer. I became familiar with the fourth competency mentioned in previous classes I have taken with Dr. Dahlquist.

	==[[User:Lena\|Lena Hunt]]==		==[[User:Lena\|Lena Hunt]]==

@@ Line 33: / Line 33: @@
 *Data Visualization: I would still like to learn more about how they actually design the database. I just think this would be a useful skill to have if I ever want to design either a lab or personal webpage.
 *Data Preservation: I still feel like I don't know much at all about how data is actually preserved or how servers work. I don't know why I would ever need to know this, but I think it would be interesting to know about. (This is one of the field's where I still don't know what I don't know.)
 ==[[User:HDelgadi|Hilda]] and [[User:mpetredi|Mitchell]]==

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 Database: [[TFClass]]
 :Database Webiste: [http://tfclass.bioinf.med.uni-goettingen.de/tfclass TFClass]
 ==[[User:HDelgadi|Hilda]] and [[User:mpetredi|Mitchell]]==

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 The first, second, seventh, and ninth competencies are ones that I have gained a greater understanding for since I was able to see how databases have links to other databases to provide more information that they may lack in providing. Each database has its own specialty, so knowing what you want to research can help in pin-pointing the appropriate database. I also have a deeper understanding in data curation whether it be manually or electronically and in-house or community manual curation since I had to figure out what methods of curation the database Protegen used. The ninth competency, in my opinion, goes hand-in-hand with the seventh competency in terms of data preservation which includes curation, updates, and database networking and relevancy.
 #Which of these core competencies (if any) do you want to know more about? Why?
 [[User:HDelgadi|HDelgadi]] ([[User talk:HDelgadi|talk]]) 20:54, 3 October 2013 (PDT)

@@ Line 10: / Line 10: @@
 :Link to Website: [[http://www.violinet.org/protegen/ Protogen]]
 :Link to Presentation: [[File:Protegen.pdf]]
 #Which of these core competencies (if any) were you familiar with before taking this class? How did you become familiar with them?

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 The twelfth core competency would be the most familiar concept that I can relate to since as a student I've had to learn about citing data in my essays or in projects.
 #Which of these core competencies (if any) did you gain a deeper understanding of by doing this exercise? What about the exercise taught you about them?
 #Which of these core competencies (if any) do you want to know more about? Why?