<?xml version="1.0"?>
<?xml-stylesheet type="text/css" href="https://xmlpipedb.lmucs.io/biodb/fall2013/skins/common/feed.css?303"?>
<feed xmlns="http://www.w3.org/2005/Atom" xml:lang="en">
		<id>https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?action=history&amp;feed=atom&amp;title=Kmeilak_Week_7</id>
		<title>Kmeilak Week 7 - Revision history</title>
		<link rel="self" type="application/atom+xml" href="https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?action=history&amp;feed=atom&amp;title=Kmeilak_Week_7"/>
		<link rel="alternate" type="text/html" href="https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Kmeilak_Week_7&amp;action=history"/>
		<updated>2026-06-02T14:17:31Z</updated>
		<subtitle>Revision history for this page on the wiki</subtitle>
		<generator>MediaWiki 1.20.3</generator>

	<entry>
		<id>https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Kmeilak_Week_7&amp;diff=2753&amp;oldid=prev</id>
		<title>Kmeilak at 07:26, 9 October 2013</title>
		<link rel="alternate" type="text/html" href="https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Kmeilak_Week_7&amp;diff=2753&amp;oldid=prev"/>
				<updated>2013-10-09T07:26:47Z</updated>
		
		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;table class=&#039;diff diff-contentalign-left&#039;&gt;
				&lt;col class=&#039;diff-marker&#039; /&gt;
				&lt;col class=&#039;diff-content&#039; /&gt;
				&lt;col class=&#039;diff-marker&#039; /&gt;
				&lt;col class=&#039;diff-content&#039; /&gt;
			&lt;tr style=&#039;vertical-align: top;&#039;&gt;
			&lt;td colspan=&#039;2&#039; style=&quot;background-color: white; color:black;&quot;&gt;← Older revision&lt;/td&gt;
			&lt;td colspan=&#039;2&#039; style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 07:26, 9 October 2013&lt;/td&gt;
			&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 54:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 54:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;16. What types of control spots would you like to see in this type of experiment? How could you verify that you had truly deleted or overexpressed a particular gene?&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;16. What types of control spots would you like to see in this type of experiment? How could you verify that you had truly deleted or overexpressed a particular gene?&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;−&lt;/td&gt;&lt;td style=&quot;background: #ffa; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;I would like to see control spots for the transcription factor gene as well as the gene for the repressor. It is possible to verify a particular gene was deleted or overexpressed by looking at mRNA expression levels. If the gene is gone, the mRNA will be as well, and if it is overexpressed, then there will be more mRNA.&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;I would like to see &lt;ins class=&quot;diffchange diffchange-inline&quot;&gt;yellow &lt;/ins&gt;control spots for the transcription factor gene as well as the gene for the repressor. It is possible to verify a particular gene was deleted or overexpressed by looking at mRNA expression levels. If the gene is gone, the mRNA will be as well, and if it is overexpressed, then there will be more mRNA.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;{{Kmeilak}}&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;{{Kmeilak}}&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;[[Category:Journal Entry]]&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;[[Category:Journal Entry]]&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Kmeilak</name></author>	</entry>

Unexpected non-MediaWiki exception encountered, of type &quot;Error&quot;<br />
Error: Call to undefined function each() in /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php:374<br />
Stack trace:<br />
#0 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(480): _DiffEngine-&gt;_diag()<br />
#1 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(291): _DiffEngine-&gt;_compareseq()<br />
#2 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(175): _DiffEngine-&gt;diff_local()<br />
#3 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(653): _DiffEngine-&gt;diff()<br />
#4 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(763): Diff-&gt;__construct()<br />
#5 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(655): DifferenceEngine-&gt;generateDiffBody()<br />
#6 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(593): DifferenceEngine-&gt;getDiffBody()<br />
#7 /apps/xmlpipedb/biodb/fall2013/includes/FeedUtils.php(147): DifferenceEngine-&gt;getDiff()<br />
#8 /apps/xmlpipedb/biodb/fall2013/includes/actions/HistoryAction.php(303): FeedUtils::formatDiffRow()<br />
#9 /apps/xmlpipedb/biodb/fall2013/includes/actions/HistoryAction.php(268): HistoryAction-&gt;feedItem()<br />
#10 /apps/xmlpipedb/biodb/fall2013/includes/actions/HistoryAction.php(121): HistoryAction-&gt;feed()<br />
#11 /apps/xmlpipedb/biodb/fall2013/includes/Action.php(541): HistoryAction-&gt;onView()<br />
#12 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(427): FormlessAction-&gt;show()<br />
#13 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(304): MediaWiki-&gt;performAction()<br />
#14 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(536): MediaWiki-&gt;performRequest()<br />
#15 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(446): MediaWiki-&gt;main()<br />
#16 /apps/xmlpipedb/biodb/fall2013/index.php(59): MediaWiki-&gt;run()<br />
#17 {main}<br />

