https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?action=history&feed=atom&title=Laurmagee%3A_Week_13 Laurmagee: Week 13 - Revision history 2026-06-02T22:56:03Z Revision history for this page on the wiki MediaWiki 1.20.3 https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Laurmagee:_Week_13&diff=7060&oldid=prev Laurmagee at 19:10, 13 December 2013 2013-12-13T19:10:31Z <p></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 19:10, 13 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The following link is to the Sinorhizobium meliloti team page: [[Team Name]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>The following link is to the Sinorhizobium meliloti team page: [[Team Name]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* After downloading all of the files off of the following link last week: [[http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-785/?keywords=&amp;organism=Sinorhizobium%20meliloti&amp;array=&amp;exptype| Microarray Downloads]], I began compiling the data and computing the log((Cy5 Signal- Cy5 background)/(Cy3 Signal- Cy3 background)) for every replicate (1-3) corresponding with the <del class="diffchange diffchange-inline">three </del>different times offered in the experiment (15, 30, 60, 240) when adding 0.7 M sucrose.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* After downloading all of the files off of the following link last week: [[http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-785/?keywords=&amp;organism=Sinorhizobium%20meliloti&amp;array=&amp;exptype| Microarray Downloads]], I began compiling the data and computing the log((Cy5 Signal- Cy5 background)/(Cy3 Signal- Cy3 background)) for every replicate (1-3) corresponding with the <ins class="diffchange diffchange-inline">four </ins>different times offered in the experiment (15, 30, 60, 240) when adding 0.7 M sucrose.</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>* The following files are representing the data for every specific replicate at a specific time. The labeling 700S represents .7M sucrose and the following numbers (1-3) represent the replicate number. Then t(15, 30, 60, 240) represents each time period that was taken. &#160;</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>* The following files are representing the data for every specific replicate at a specific time. The labeling 700S represents .7M sucrose and the following numbers (1-3) represent the replicate number. Then t(15, 30, 60, 240) represents each time period that was taken. &#160;</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>**[[File:700S1-t15.xls]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>**[[File:700S1-t15.xls]]</div></td></tr> </table> Laurmagee  
* The above steps were repeated twelve times for each of the three replicates and their four time measurements.  
 
* The above steps were repeated twelve times for each of the three replicates and their four time measurements.  
 
*The following file is a compilation of all the Cy5/Cy3 ratios, with the addition of the log of these values: [[File:Compiled Ratios and Logs.xls]]
 
*The following file is a compilation of all the Cy5/Cy3 ratios, with the addition of the log of these values: [[File:Compiled Ratios and Logs.xls]]
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