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		<id>https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?action=history&amp;feed=atom&amp;title=Laurmagee%3A_Week_2</id>
		<title>Laurmagee: Week 2 - Revision history</title>
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		<updated>2026-04-30T15:51:51Z</updated>
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	<entry>
		<id>https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Laurmagee:_Week_2&amp;diff=1548&amp;oldid=prev</id>
		<title>Laurmagee: /* Genetic Code (Corrected) */</title>
		<link rel="alternate" type="text/html" href="https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Laurmagee:_Week_2&amp;diff=1548&amp;oldid=prev"/>
				<updated>2013-09-13T03:40:29Z</updated>
		
		<summary type="html">&lt;p&gt;‎&lt;span dir=&quot;auto&quot;&gt;&lt;span class=&quot;autocomment&quot;&gt;Genetic Code (Corrected)&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;
&lt;table class=&#039;diff diff-contentalign-left&#039;&gt;
				&lt;col class=&#039;diff-marker&#039; /&gt;
				&lt;col class=&#039;diff-content&#039; /&gt;
				&lt;col class=&#039;diff-marker&#039; /&gt;
				&lt;col class=&#039;diff-content&#039; /&gt;
			&lt;tr style=&#039;vertical-align: top;&#039;&gt;
			&lt;td colspan=&#039;2&#039; style=&quot;background-color: white; color:black;&quot;&gt;← Older revision&lt;/td&gt;
			&lt;td colspan=&#039;2&#039; style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 03:40, 13 September 2013&lt;/td&gt;
			&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 22:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 22:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*#The amino acid &amp;quot;M&amp;quot; was added to the translated sequences along with the original term &amp;quot;start&amp;quot;. This edit was made, because I had originally left out the letter &amp;quot;M&amp;quot; in my translated sequence, because I thought the word &amp;quot;start&amp;quot; was sufficient. &amp;#160;&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*#The amino acid &amp;quot;M&amp;quot; was added to the translated sequences along with the original term &amp;quot;start&amp;quot;. This edit was made, because I had originally left out the letter &amp;quot;M&amp;quot; in my translated sequence, because I thought the word &amp;quot;start&amp;quot; was sufficient. &amp;#160;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*#The amino acid &amp;quot;A&amp;quot; was added to both the 1st and 5th reading frame sequences. I had originally created an amino acid deletion among the translated sequences, by leaving out &amp;quot;A&amp;quot; in both reading frames. This was my own error of not paying close enough attention to all of the codons when translating.&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*#The amino acid &amp;quot;A&amp;quot; was added to both the 1st and 5th reading frame sequences. I had originally created an amino acid deletion among the translated sequences, by leaving out &amp;quot;A&amp;quot; in both reading frames. This was my own error of not paying close enough attention to all of the codons when translating.&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt; &lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;[[User:Laurmagee|Laurmagee]] ([[User talk:Laurmagee|talk]]) 20:40, 12 September 2013 (PDT)&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Laurmagee</name></author>	</entry>

	<entry>
		<id>https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Laurmagee:_Week_2&amp;diff=1427&amp;oldid=prev</id>
		<title>Laurmagee: Edits to Genetic Code</title>
		<link rel="alternate" type="text/html" href="https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Laurmagee:_Week_2&amp;diff=1427&amp;oldid=prev"/>
				<updated>2013-09-12T16:44:11Z</updated>
		
		<summary type="html">&lt;p&gt;Edits to Genetic Code&lt;/p&gt;
&lt;table class=&#039;diff diff-contentalign-left&#039;&gt;
				&lt;col class=&#039;diff-marker&#039; /&gt;
				&lt;col class=&#039;diff-content&#039; /&gt;
				&lt;col class=&#039;diff-marker&#039; /&gt;
				&lt;col class=&#039;diff-content&#039; /&gt;
			&lt;tr style=&#039;vertical-align: top;&#039;&gt;
			&lt;td colspan=&#039;2&#039; style=&quot;background-color: white; color:black;&quot;&gt;← Older revision&lt;/td&gt;
			&lt;td colspan=&#039;2&#039; style=&quot;background-color: white; color:black;&quot;&gt;Revision as of 16:44, 12 September 2013&lt;/td&gt;
			&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 8:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 8:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*5th reading frame (-2): K-(start)-P-P-A-E-L-A-G-L-Y-A-E-H-G-I-S-I: open reading frame (no stop codon included)&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*5th reading frame (-2): K-(start)-P-P-A-E-L-A-G-L-Y-A-E-H-G-I-S-I: open reading frame (no stop codon included)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*6th reading frame (-3): K-C-R-Q-R-N-W-L-G-Y-T-R-N-(start)-V-L-A-Y: open reading frame (no stop codon included)&lt;/div&gt;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;&amp;#160;&lt;/td&gt;&lt;td style=&quot;background: #eee; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;*6th reading frame (-3): K-C-R-Q-R-N-W-L-G-Y-T-R-N-(start)-V-L-A-Y: open reading frame (no stop codon included)&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;===Genetic Code (Corrected)=== &lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;* 5&amp;#039;-CGTATGCTAATACCATGTTCCGCGTATAACCCAGCCGCCAGTTCCGCTGGCGGCATTTTA-3&amp;#039; -template strand&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;* 3&amp;#039;-GCATACGATTATGGTACAAGGCGCATATTGGGTCGGCGGTCAAGGCGACCGCCGTAAAAT-5&amp;#039; -complementary strand&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*1st reading frame (+1): R-M (start)-L-I-P-C-S-A-Y-N-P-A-A-S-S-A-G-G-I-L: open reading frame (no stop codon included)&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*2nd reading frame (+2): V-C-(stop)-Y-H-V-P-R-I-T-Q-P-P-V-P-L-A-A-F: stop codon included&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*3rd reading frame (+3): Y-A-N-T-M (start)-F-R-V-(stop)-P-S-R-Q-F-R-W-P-H-F: stop codon included&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*4th reading frame (-1): (stop)-N-A-A-S-G-T-G-G-W-V-I-R-G-T-W-Y-(stop)-H-T: stop codon included&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*5th reading frame (-2): K-M (start)-P-P-A-E-L-A-A-G-L-Y-A-E-H-G-I-S-I: open reading frame (no stop codon included)&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*6th reading frame (-3): K-C-R-Q-R-N-W-L-G-Y-T-R-N-M (start)-V-L-A-Y: open reading frame (no stop codon included)&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*Edits made were the following: &lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*#The amino acid &amp;quot;M&amp;quot; was added to the translated sequences along with the original term &amp;quot;start&amp;quot;. This edit was made, because I had originally left out the letter &amp;quot;M&amp;quot; in my translated sequence, because I thought the word &amp;quot;start&amp;quot; was sufficient. &lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td colspan=&quot;2&quot;&gt;&amp;#160;&lt;/td&gt;&lt;td class=&#039;diff-marker&#039;&gt;+&lt;/td&gt;&lt;td style=&quot;background: #cfc; color:black; font-size: smaller;&quot;&gt;&lt;div&gt;&lt;ins style=&quot;color: red; font-weight: bold; text-decoration: none;&quot;&gt;*#The amino acid &amp;quot;A&amp;quot; was added to both the 1st and 5th reading frame sequences. I had originally created an amino acid deletion among the translated sequences, by leaving out &amp;quot;A&amp;quot; in both reading frames. This was my own error of not paying close enough attention to all of the codons when translating.&lt;/ins&gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Laurmagee</name></author>	</entry>

	<entry>
		<id>https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Laurmagee:_Week_2&amp;diff=1425&amp;oldid=prev</id>
		<title>Laurmagee: Added Assignment</title>
		<link rel="alternate" type="text/html" href="https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Laurmagee:_Week_2&amp;diff=1425&amp;oldid=prev"/>
				<updated>2013-09-12T16:41:34Z</updated>
		
		<summary type="html">&lt;p&gt;Added Assignment&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;===Genetic Code (Original)=== &lt;br /&gt;
* 5&amp;#039;-CGTATGCTAATACCATGTTCCGCGTATAACCCAGCCGCCAGTTCCGCTGGCGGCATTTTA-3&amp;#039; -template strand&lt;br /&gt;
* 3&amp;#039;-GCATACGATTATGGTACAAGGCGCATATTGGGTCGGCGGTCAAGGCGACCGCCGTAAAAT-5&amp;#039; -complementary strand&lt;br /&gt;
*1st reading frame (+1): R-M (start)-L-I-P-C-S-Y-N-P-A-A-S-S-A-G-G-I-L: open reading frame (no stop codon included)&lt;br /&gt;
*2nd reading frame (+2): V-C-(stop)-Y-H-V-P-R-I-T-Q-P-P-V-P-L-A-A-F: stop codon included&lt;br /&gt;
*3rd reading frame (+3): Y-A-N-T-M (start)-F-R-V-(stop)-P-S-R-Q-F-R-W-P-H-F: stop codon included&lt;br /&gt;
*4th reading frame (-1): (stop)-N-A-A-S-G-T-G-G-W-V-I-R-G-T-W-Y-(stop)-H-T: stop codon included&lt;br /&gt;
*5th reading frame (-2): K-(start)-P-P-A-E-L-A-G-L-Y-A-E-H-G-I-S-I: open reading frame (no stop codon included)&lt;br /&gt;
*6th reading frame (-3): K-C-R-Q-R-N-W-L-G-Y-T-R-N-(start)-V-L-A-Y: open reading frame (no stop codon included)&lt;/div&gt;</summary>
		<author><name>Laurmagee</name></author>	</entry>

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