Lena Week 8 - Revision history

Lena: /* MAPPFinder Procedure */

2013-10-18T05:00:30Z

‎MAPPFinder Procedure

2013-10-18T04:57:54Z

‎Part 1

2013-10-17T17:47:16Z

‎MAPPFinder Procedure

2013-10-17T17:38:21Z

‎GenMAPP Expression Dataset Manager Procedure

2013-10-17T17:32:04Z

‎Gene: PNP_VIBCH

2013-10-17T17:31:12Z

‎MAPPFinder Procedure

2013-10-17T17:29:28Z

‎MAPPFinder Procedure

2013-10-17T17:28:39Z

‎MAPPFinder Procedure

2013-10-17T17:27:18Z

‎Part 2

2013-10-17T17:25:34Z

‎Part 2

@@ Line 49: / Line 49: @@
 **VC2350: deoxyribose-phosphate aldolase activity, lyase activity, catalytic activity
 **VCA0583: outer membrane-bounded periplasmic space
-*COMPARE WITH BUDDY!!!!!
+*My buddy and I had different terms associated with the genes.  Since the last update, more terms were added for 2010.
+:
 * I clicked on the GO term nucleotidyltransferase activity and this window came up.  There were significant decreases in  six places for VC0647.  [[Image:Nucleotydal_transferase.PNG]]

@@ Line 3: / Line 3: @@
 :[[Media: Merrell_Compiled_Raw_Data_Vibrio_LH_20131015.txt ‎]]
 :[[Media: Merrell_Compiled_Raw_Data_Vibrio_LH_20131015.xls ‎]]
 =='''Part 2'''==

@@ Line 37: / Line 37: @@
 #Cellular Nitrogen Compound Metabolic Process
 *Here is an image of the results.  [[Image:Capture5.PNG]]
-*COMPARE LIST WITH BUDDY!!!!!!!!
+*We had very different lists of top 10 GO terms.  Her's is probably more accurate since it is the updated version.
+:
 *I searched GO terms associated with the genes mentioned by Merrel et al.

@@ Line 12: / Line 12: @@
 *The exception file was saved here. [[Media:Merrell_Compiled_Raw_Data_Vibrio_AJV.EX.txt]]
 *There were 772 errors due to genes not being found.
-*I had more errors than my partner who was using the updated version, she has 122.  I think the updated version probably had a more comprehensive list of genes for ''Vibrio cholerae''.
+*I had more errors than my partner who was using the updated version, she has 121.  I think the updated version probably had a more comprehensive list of genes for ''Vibrio cholerae''.
+:
+:

@@ Line 53: / Line 53: @@
 ====Gene: PNP_VIBCH====
+:
-*I doubled clicked on the gene PNP_VIBCH and was directed to this webpage.
+*I doubled clicked on the gene PNP_VIBCH and was directed to this webpage.  The function of this gene is to aid in mRNA degredation.
 :[[Image:Capture.PNG]]

@@ Line 51: / Line 51: @@
 * I clicked on the GO term nucleotidyltransferase activity and this window came up.  There were significant decreases in  six places for VC0647.  [[Image:Nucleotydal_transferase.PNG]]
+:
-*I doubled clicked on the gene PNP_VIBCH and was directed to this webpage...
+*I doubled clicked on the gene PNP_VIBCH and was directed to this webpage.
 ===Uploaded Files===