Stephen Louie Week 8 - Revision history

Slouie: Added category and signature

2013-10-18T14:16:30Z

Added category and signature

2013-10-18T14:15:35Z

‎Part 2

2013-10-18T13:43:50Z

‎Part 2

2013-10-18T13:27:49Z

edited part 2

2013-10-18T13:23:26Z

‎Part 2

2013-10-18T13:18:00Z

‎Part 2

2013-10-18T12:57:43Z

2013-10-18T12:56:20Z

‎Part 2

2013-10-18T12:53:57Z

‎Part 2

2013-10-18T12:52:37Z

‎Part 2

← Older revision		Revision as of 14:16, 18 October 2013
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	[[Media:Merrell_Compiled_Raw_Data_Vibrio_SL_10102013.gmf\|Merrell_Compiled_Raw_Data_Vibrio_SL_10102013.gmf]]		[[Media:Merrell_Compiled_Raw_Data_Vibrio_SL_10102013.gmf\|Merrell_Compiled_Raw_Data_Vibrio_SL_10102013.gmf]]
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		+	[[User:Slouie\|Slouie]] ([[User talk:Slouie\|talk]]) 07:16, 18 October 2013 (PDT)
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		+	[[Category: Journal Entry]]

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 *Saved changes to an Excel spreadsheet. Select File > Save As and select Excel workbook (.xls) from the drop-down menu.
 *Uploaded .xls file to journal page.
 =Files=

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 *Clicked on GO term "one-carbon metabolic process".  Gene expression did not change significantly
 **Function of VC0941 is to catalyze the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This synthesizes one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. VC0941 Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, through a retro-aldol mechanism
+*Launched Microsoft Excel. Opened the copies of the .txt files in Excel. Clicked "Show all files" and clicked "Finish"
 =Files=

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 *Clicked on entry  [http://www.uniprot.org/uniprot/Q9KTG1 Q9KTG1]
 *Clicked on GO term "one-carbon metabolic process".  Gene expression did not change significantly
 =Files=

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 **VCA0583: Transport, Outer Membrane-Bounded Periplasmic Space, Transporter Activity
 **My search results were much more extensive then my partner's.  This was probably because my database was more recently updated and contained information of genes that was not discovered at the time of my partner's database.
-*Went to [http://www.uniprot.org/ UniProt site] and entered "VC0028" into the search box
+*Went to [http://www.uniprot.org/ UniProt site] and entered "VC0941" into the search box
-*Clicked on entry  [http://www.uniprot.org/uniprot/Q9KVW0/ Q9KVWO]
+*Clicked on entry  [http://www.uniprot.org/uniprot/Q9KTG1 Q9KTG1]
-*Clicked on GO term "4 iron, 4 sulfur cluster binding".  Gene expression did not change significantly
+*Clicked on GO term "one-carbon metabolic process".  Gene expression did not change significantly
 =Files=

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 **VC2350: Deoxyribonucleotide Catabolic Process, Metabolic Process, Cytoplasm, Catalytic Activity, Lyase Activity, Deoxyribose-phosphate aldolase Activity
 **VCA0583: Transport, Outer Membrane-Bounded Periplasmic Space, Transporter Activity
 =Files=

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 **VC0647: mRNA Catabolic Process, RNA Processing, Cytoplasm, Mitochondrion, RNA Binding, 3'-5'-exoribonuclease Activity, Transferase Activity, Nucleotidyltransferase Activity, Polyribonucleotide Nucleotidyltransferase Activity
 **VC0468: Glutathione Biosynthetic Process, Metal Ion Binding, Nucleotide Binding, ATP Binding, Catalytic Activity, Ligase Activity, Glutathione Synthase Activity
 =Files=

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 **VC0869: Glutamine Metabolic Process, Purine Nucleotide Biosynthetic Process, 'de novo' IMP Biosynthetic Process, Cytoplasm, Nucleotide Binding, ATP binding, Catalytic Activity, Ligase Activity, Phosphoribosylformyglycinamidine Synthase Activity
 **VC0051: Purine Nucleotide Biosynthetic Process, 'de novo' IMP Bisynthetic Process, Nucleotide Binding, ATP Binding, Catalytic Activity, Lyase Activity, Carboxy-lyase Activity, Phosphoribosylaminoimidazole
 =Files=