https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?action=history&feed=atom&title=Team_H%28oo%29KD_Final_Project_Deliverables Team H(oo)KD Final Project Deliverables - Revision history 2026-07-04T05:32:57Z Revision history for this page on the wiki MediaWiki 1.20.3 https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7203&oldid=prev Kdahlquist: fixed link to EB to RB with rif decreased 2013-12-15T22:45:22Z <p>fixed link to EB to RB with rif decreased</p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 22:45, 15 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 14:</td> <td colspan="2" class="diff-lineno">Line 14:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media: EB to RB No Rif 20131207 KS DW-Criterion1-GO.xls|EB to RB No Rif decreased]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media: EB to RB No Rif 20131207 KS DW-Criterion1-GO.xls|EB to RB No Rif decreased]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media: MAPPFinder Results EB to RB Rifampicin 20131212-Criterion0-GO (1).xls ‎| EB to RB Rif Increased]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media: MAPPFinder Results EB to RB Rifampicin 20131212-Criterion0-GO (1).xls ‎| EB to RB Rif Increased]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*[[Media:<del class="diffchange diffchange-inline">EB to RB No Rif 20131207 KS DW</del>-Criterion1-<del class="diffchange diffchange-inline">GO</del>.xls|EB to RB <del class="diffchange diffchange-inline">No </del>Rif decreased]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*[[Media:<ins class="diffchange diffchange-inline">MAPPFinder_Results_EB_to_RB_Rifampicin_20131212</ins>-Criterion1-<ins class="diffchange diffchange-inline">GO_(1)</ins>.xls|EB to RB Rif decreased]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):[[Media:EBtoRB_Rifampicin_Cellular_Carbohydrate_Metabolic_Process.mapp]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):[[Media:EBtoRB_Rifampicin_Cellular_Carbohydrate_Metabolic_Process.mapp]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):[[Media:EBtoRB Rifampicin Cellular Carbohydrate Metabolic Process.jpg]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):[[Media:EBtoRB Rifampicin Cellular Carbohydrate Metabolic Process.jpg]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf): [[Media:Report for Final Project HDDWKS 20131213.pdf|Report_for_Final_Project_HDDWKS_20131213.pdf]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf): [[Media:Report for Final Project HDDWKS 20131213.pdf|Report_for_Final_Project_HDDWKS_20131213.pdf]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12): [[Media:Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf|Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12): [[Media:Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf|Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf]]</div></td></tr> </table> Kdahlquist https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7195&oldid=prev Dwilliams: /* Deliverables */ Fixed error 2013-12-14T00:38:57Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> Fixed error</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:38, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 6:</td> <td colspan="2" class="diff-lineno">Line 6:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*ReadMe file including the gene database schema:[[Media:ReadMe Ct-Std External 20131122.pdf|ReadMe_Ct-Std_External_20131122.pdf]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*ReadMe file including the gene database schema:[[Media:ReadMe Ct-Std External 20131122.pdf|ReadMe_Ct-Std_External_20131122.pdf]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Gene database testing report: [[Media:Ct External 20131121 Gene Database Testing Report.pdf|Ct_External_20131121_Gene_Database_Testing_Report.pdf]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Gene database testing report: [[Media:Ct External 20131121 Gene Database Testing Report.pdf|Ct_External_20131121_Gene_Database_Testing_Report.pdf]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*Processed and analyzed DNA microarray dataset (.xls):[[Media:Final Excel Sheet Used for Project.xls | <del class="diffchange diffchange-inline">rocessed </del>and analyzed DNA microarray dataset]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*Processed and analyzed DNA microarray dataset (.xls):[[Media:Final Excel Sheet Used for Project.xls | <ins class="diffchange diffchange-inline">processed </ins>and analyzed DNA microarray dataset]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*GenMAPP Expression Dataset file (.gex):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*GenMAPP Expression Dataset file (.gex):</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in absence of rifampicin: [[Media: For GenMAPP Chlamydia V4 20131205 KS.gex|For_GenMAPP_Absence_of_Rifampicin.gex]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in absence of rifampicin: [[Media: For GenMAPP Chlamydia V4 20131205 KS.gex|For_GenMAPP_Absence_of_Rifampicin.gex]]</div></td></tr> </table> Dwilliams https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7193&oldid=prev Dwilliams: /* Deliverables */ added dna microarray dataset 2013-12-14T00:38:34Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> added dna microarray dataset</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:38, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 6:</td> <td colspan="2" class="diff-lineno">Line 6:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*ReadMe file including the gene database schema:[[Media:ReadMe Ct-Std External 20131122.pdf|ReadMe_Ct-Std_External_20131122.pdf]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*ReadMe file including the gene database schema:[[Media:ReadMe Ct-Std External 20131122.pdf|ReadMe_Ct-Std_External_20131122.pdf]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Gene database testing report: [[Media:Ct External 20131121 Gene Database Testing Report.pdf|Ct_External_20131121_Gene_Database_Testing_Report.pdf]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Gene database testing report: [[Media:Ct External 20131121 Gene Database Testing Report.pdf|Ct_External_20131121_Gene_Database_Testing_Report.pdf]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*Processed and analyzed DNA microarray dataset (.xls):</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*Processed and analyzed DNA microarray dataset (.xls):<ins class="diffchange diffchange-inline">[[Media:Final Excel Sheet Used for Project.xls | rocessed and analyzed DNA microarray dataset]]</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*GenMAPP Expression Dataset file (.gex):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*GenMAPP Expression Dataset file (.gex):</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in absence of rifampicin: [[Media: For GenMAPP Chlamydia V4 20131205 KS.gex|For_GenMAPP_Absence_of_Rifampicin.gex]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in absence of rifampicin: [[Media: For GenMAPP Chlamydia V4 20131205 KS.gex|For_GenMAPP_Absence_of_Rifampicin.gex]]</div></td></tr> </table> Dwilliams https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7189&oldid=prev Ksherbina: /* Deliverables */ Added report 2013-12-14T00:34:29Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> Added report</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:34, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 17:</td> <td colspan="2" class="diff-lineno">Line 17:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):[[Media:EBtoRB_Rifampicin_Cellular_Carbohydrate_Metabolic_Process.mapp]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):[[Media:EBtoRB_Rifampicin_Cellular_Carbohydrate_Metabolic_Process.mapp]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):[[Media:EBtoRB Rifampicin Cellular Carbohydrate Metabolic Process.jpg]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):[[Media:EBtoRB Rifampicin Cellular Carbohydrate Metabolic Process.jpg]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*Group Report (.pdf):</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*Group Report (.pdf): <ins class="diffchange diffchange-inline">[[Media:Report for Final Project HDDWKS 20131213.pdf|Report_for_Final_Project_HDDWKS_20131213.pdf]]</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12): [[Media:Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf|Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12): [[Media:Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf|Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf]]</div></td></tr> </table> Ksherbina https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7188&oldid=prev Ksherbina: /* Deliverables */ Added powerpoint 2013-12-14T00:33:53Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> Added powerpoint</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:33, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 18:</td> <td colspan="2" class="diff-lineno">Line 18:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):[[Media:EBtoRB Rifampicin Cellular Carbohydrate Metabolic Process.jpg]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):[[Media:EBtoRB Rifampicin Cellular Carbohydrate Metabolic Process.jpg]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf):</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12):</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12): <ins class="diffchange diffchange-inline">[[Media:Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf|Transcriptional_Analysis_of_the_Developmental_Stages_of_Chlamydia_trachomatis_A_HAR-13_HDKSDW_20131212.pdf]]</ins></div></td></tr> </table> Ksherbina https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7187&oldid=prev Dwilliams: /* Deliverables */ added jpeg 2013-12-14T00:32:23Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> added jpeg</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:32, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 16:</td> <td colspan="2" class="diff-lineno">Line 16:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media:EB to RB No Rif 20131207 KS DW-Criterion1-GO.xls|EB to RB No Rif decreased]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media:EB to RB No Rif 20131207 KS DW-Criterion1-GO.xls|EB to RB No Rif decreased]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):[[Media:EBtoRB_Rifampicin_Cellular_Carbohydrate_Metabolic_Process.mapp]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):[[Media:EBtoRB_Rifampicin_Cellular_Carbohydrate_Metabolic_Process.mapp]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):<ins class="diffchange diffchange-inline">[[Media:EBtoRB Rifampicin Cellular Carbohydrate Metabolic Process.jpg]]</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf):</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12):</div></td></tr> </table> Dwilliams https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7183&oldid=prev Dwilliams: /* Deliverables */ added mapp 2013-12-14T00:30:43Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> added mapp</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:30, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media: MAPPFinder Results EB to RB Rifampicin 20131212-Criterion0-GO (1).xls ‎| EB to RB Rif Increased]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media: MAPPFinder Results EB to RB Rifampicin 20131212-Criterion0-GO (1).xls ‎| EB to RB Rif Increased]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media:EB to RB No Rif 20131207 KS DW-Criterion1-GO.xls|EB to RB No Rif decreased]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*[[Media:EB to RB No Rif 20131207 KS DW-Criterion1-GO.xls|EB to RB No Rif decreased]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*Sample MAPP file of a relevant biological pathway for your species (.mapp):<ins class="diffchange diffchange-inline">[[Media:EBtoRB_Rifampicin_Cellular_Carbohydrate_Metabolic_Process.mapp]]</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*Picture of the MAPP (.jpeg):</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Group Report (.pdf):</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*PowerPoint presentation (given on Thursday, December 12):</div></td></tr> </table> Dwilliams https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7181&oldid=prev Dwilliams: /* Deliverables */ Added filtered mappfinder results 2013-12-14T00:27:54Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> Added filtered mappfinder results</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:27, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 11:</td> <td colspan="2" class="diff-lineno">Line 11:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in presence of rifampicin: [[Media:For GenMAPP Chlamydia V4 20131212 KS Presence of Rifampicin.gex|For_GenMAPP Chlamydia_V4_20131212_KS_Presence_of_Rifampicin.gex]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in presence of rifampicin: [[Media:For GenMAPP Chlamydia V4 20131212 KS Presence of Rifampicin.gex|For_GenMAPP Chlamydia_V4_20131212_KS_Presence_of_Rifampicin.gex]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Filtered MAPPFinder Results (.xls):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Filtered MAPPFinder Results (.xls):</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*[[Media: EB to RB No Rif 20131207 KS DW-Criterion0-GO.xls|EB to RB No Rif Increased]]</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*[[Media: EB to RB No Rif 20131207 KS DW-Criterion1-GO.xls|EB to RB No Rif decreased]]</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">*[[Media: MAPPFinder Results EB to RB Rifampicin 20131212-Criterion0-GO (1).xls ‎| EB to RB Rif Increased]]</ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="background: #cfc; 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color:black;">Revision as of 00:17, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 8:</td> <td colspan="2" class="diff-lineno">Line 8:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Processed and analyzed DNA microarray dataset (.xls):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Processed and analyzed DNA microarray dataset (.xls):</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*GenMAPP Expression Dataset file (.gex):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*GenMAPP Expression Dataset file (.gex):</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>:*For data collected in absence of rifampicin: [[Media: For GenMAPP Chlamydia V4 20131205 KS.gex|<del class="diffchange diffchange-inline">For GenMAPP absence of Rifampicin</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>:*For data collected in absence of rifampicin: [[Media: For GenMAPP Chlamydia V4 20131205 KS.gex|<ins class="diffchange diffchange-inline">For_GenMAPP_Absence_of_Rifampicin.gex</ins>]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in presence of rifampicin: [[Media:For GenMAPP Chlamydia V4 20131212 KS Presence of Rifampicin.gex|For_GenMAPP Chlamydia_V4_20131212_KS_Presence_of_Rifampicin.gex]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>:*For data collected in presence of rifampicin: [[Media:For GenMAPP Chlamydia V4 20131212 KS Presence of Rifampicin.gex|For_GenMAPP Chlamydia_V4_20131212_KS_Presence_of_Rifampicin.gex]]</div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Filtered MAPPFinder Results (.xls):</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Filtered MAPPFinder Results (.xls):</div></td></tr> </table> Ksherbina https://xmlpipedb.lmucs.io/biodb/fall2013/index.php?title=Team_H(oo)KD_Final_Project_Deliverables&diff=7173&oldid=prev Ksherbina: /* Deliverables */ added file 2013-12-14T00:17:11Z <p>‎<span dir="auto"><span class="autocomment">Deliverables: </span> added file</span></p> <table class='diff diff-contentalign-left'> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;'> <td colspan='2' style="background-color: white; color:black;">← Older revision</td> <td colspan='2' style="background-color: white; color:black;">Revision as of 00:17, 14 December 2013</td> </tr><tr><td colspan="2" class="diff-lineno">Line 4:</td> <td colspan="2" class="diff-lineno">Line 4:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Gene database for &#039;&#039;Chlamydia trachomatis&#039;&#039; A/HAR-13 (.gdb): [[Media:Ct-Std External 20131121.gdb|Ct-Std_External_20131121.gdb]]</div></td><td class='diff-marker'>&#160;</td><td style="background: #eee; color:black; font-size: smaller;"><div>*Gene database for &#039;&#039;Chlamydia trachomatis&#039;&#039; A/HAR-13 (.gdb): [[Media:Ct-Std External 20131121.gdb|Ct-Std_External_20131121.gdb]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="background: #ffa; color:black; font-size: smaller;"><div>*ReadMe file including the gene database schema:</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>*ReadMe file including the gene database schema:<ins class="diffchange diffchange-inline">[[Media:ReadMe Ct-Std External 20131122.pdf|ReadMe_Ct-Std_External_20131122.pdf]]</ins></div></td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background: #eee; 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