Vkuehn: /* GenMAPP Expression Dataset Manager */

2013-12-11T11:56:13Z

‎GenMAPP Expression Dataset Manager

Vkuehn: /* GO Terms Analysed using MAPPFinder */

2013-12-08T00:47:22Z

‎GO Terms Analysed using MAPPFinder

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 *Average log fold change of < -0.25 and p < 0.05: 2431
 ===GenMAPP Expression Dataset Manager===
-*For exact procedure reference [Vkuehn Week 13] or the procedure from http://www.openwetware.org/wiki/BIOL367/F10:GenMAPP_and_MAPPFinder_Protocols
+*For exact procedure reference [[Vkuehn Week 13]] or the procedure from http://www.openwetware.org/wiki/BIOL367/F10:GenMAPP_and_MAPPFinder_Protocols
 * The colors were assigned to the two main criterion
 **Increased relative to control had a Log FC> 0.25 and P-Value <0.05 these were colored '''blue'''

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 :*:Integral to membrane:Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane. (under cellular compnent)
 :*:intrinsic to membrane:Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached group such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane. (under cellular component)
-:Filtered Z Score (in column N) greater than 2
+*Filtered Z Score (in column N) greater than 2
 PermuteP (in column O) less than 0.05. Number Changed (in column I) greater than or equal to 4 or 5 AND less than 100
 :*Came up with 8 results for decreased