Difference between revisions of "Kevinmcgee Week 3"
From LMU BioDB 2013
Kevinmcgee (Talk | contribs) (Created week three page) |
Kevinmcgee (Talk | contribs) (Added homework) |
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| + | ==Genetic Code By Computer== | ||
| − | [[Kevinmcgee | | + | ===Complementary Strand=== |
| − | [[ | + | |
| + | seq_file | sed "y/actg/tagc/" | ||
| + | |||
| + | ===Reading Frame Codes=== | ||
| + | +1 seq_file | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed | ||
| + | +2 seq_file | sed "s/^.//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed | ||
| + | +3 seq_file | sed "s/^..//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed | ||
| + | -1 seq_file | sed "y/actg/tgac/" | rev | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed | ||
| + | -2 seq_file | sed "y/actg/tgac/" | rev | sed "s/^.//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed | ||
| + | -3 seq_file | sed "y/actg/tgac/" | rev | sed "s/^..//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed | ||
| + | |||
| + | |||
| + | [[User:Kevinmcgee|Kevinmcgee]] ([[User talk:Kevinmcgee|talk]]) 11:14, 12 September 2013 (PDT) | ||
| + | |||
| + | [[Category:Journal Entry]] | ||
Revision as of 18:14, 12 September 2013
Genetic Code By Computer
Complementary Strand
seq_file | sed "y/actg/tagc/"
Reading Frame Codes
+1 seq_file | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed +2 seq_file | sed "s/^.//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed +3 seq_file | sed "s/^..//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed -1 seq_file | sed "y/actg/tgac/" | rev | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed -2 seq_file | sed "y/actg/tgac/" | rev | sed "s/^.//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed -3 seq_file | sed "y/actg/tgac/" | rev | sed "s/^..//g" | sed "s/.../& /g" | sed "s/t/u/g" | sed -f genetic-code.sed
Kevinmcgee (talk) 11:14, 12 September 2013 (PDT)
