Difference between revisions of "Kmeilak Week 2"
From LMU BioDB 2013
(added through -1 strand) |
(→Week 2 corrected) |
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3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5' | 3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5' | ||
| + | +1 strand: nonsense strand, first codon is stop codon. | ||
| − | + | +2 strand: M-P-P-A-E-L-A-A-G-L-T-A-E-H-G-I-S-H-T | |
| − | + | ||
| − | + | +3 strand: L-C-R-Q-R-N-W-R-L-G-Y-T-R-N-M-V-L-A-Y (note: strand does not begin with Methionine, cannot exist) | |
| − | + | ||
| + | -1 strand: M-L-I-P-C-S-A-T-A-P-A-A-V-P-A-G-G-I-L | ||
| + | |||
| + | -2 strand: V-L-stop (nonsense strand, does not begin with Methionine and terminates two amino acids in) | ||
| + | |||
| + | -3 strand: M-L-I-P-C-S-A-Y-N-H-P-P-V-P-W-P-H-F | ||
| + | |||
| + | |||
| + | the +1, -3, and -1 reading frames are open reading frames. | ||
| + | |||
| + | |||
| + | ===Week 2 corrected=== | ||
| + | |||
| + | |||
| + | Initial sequence | ||
| + | 5'-cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta-3' | ||
| + | |||
| + | Complementary sequence | ||
| + | 3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5' | ||
| + | |||
| + | |||
| + | *+1 strand: R-M-L-I-P-C-S-A-Y-N-P-A-A-S-S-A-G-G-I-L | ||
| + | *+2 strand: V-C-stop-Y-H-V-P-R-I-T-Q-P-P-V-P-L-A-A-F | ||
| + | *+3 strand: Y-A-N-T-M-F-R-V-stop-P-S-R-Q-F-R-W-R-H-F | ||
| + | *-1 strand: stop-N-A-A-S-G-T-G-G-W-V-I-R-G-T-W-Y-stop-H-T | ||
| + | *-2 strand: K-M-P-P-A-E-L-A-A-G-L-Y-A-E-H-G-I-S-I | ||
| + | *-3 strand: K-C-R-Q-R-N-W-R-L-G-Y-T-R-N-M-V-L-A-Y | ||
| + | |||
| + | |||
| + | the +1, -2, and -3 reading frames are open reading frames.0 | ||
| + | |||
| + | |||
| + | {{Kmeilak}} | ||
| + | |||
| + | [[User:Kmeilak|Kmeilak]] ([[User talk:Kmeilak|talk]]) 19:46, 12 September 2013 (PDT) | ||
| + | |||
| + | [[Category:Journal Entry]] | ||
Latest revision as of 16:23, 17 September 2013
[edit] Week 2 Individual Journal Assignment
3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5'
+1 strand: nonsense strand, first codon is stop codon.
+2 strand: M-P-P-A-E-L-A-A-G-L-T-A-E-H-G-I-S-H-T
+3 strand: L-C-R-Q-R-N-W-R-L-G-Y-T-R-N-M-V-L-A-Y (note: strand does not begin with Methionine, cannot exist)
-1 strand: M-L-I-P-C-S-A-T-A-P-A-A-V-P-A-G-G-I-L
-2 strand: V-L-stop (nonsense strand, does not begin with Methionine and terminates two amino acids in)
-3 strand: M-L-I-P-C-S-A-Y-N-H-P-P-V-P-W-P-H-F
the +1, -3, and -1 reading frames are open reading frames.
[edit] Week 2 corrected
Initial sequence
5'-cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta-3'
Complementary sequence
3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5'
- +1 strand: R-M-L-I-P-C-S-A-Y-N-P-A-A-S-S-A-G-G-I-L
- +2 strand: V-C-stop-Y-H-V-P-R-I-T-Q-P-P-V-P-L-A-A-F
- +3 strand: Y-A-N-T-M-F-R-V-stop-P-S-R-Q-F-R-W-R-H-F
- -1 strand: stop-N-A-A-S-G-T-G-G-W-V-I-R-G-T-W-Y-stop-H-T
- -2 strand: K-M-P-P-A-E-L-A-A-G-L-Y-A-E-H-G-I-S-I
- -3 strand: K-C-R-Q-R-N-W-R-L-G-Y-T-R-N-M-V-L-A-Y
the +1, -2, and -3 reading frames are open reading frames.0
- Main Page
- Kevin's User Page
- Week 1
- Week 2
- Week 3
- Week 4
- Week 5
- Week 6
- Week 7
- Week 8
- Week 9
- Week 10
- Week 11
- Week 12
- Week 13
- Week 14
- Week 15
- Class Journal Week 1
- Class Journal Week 2
- Class Journal Week 3
- Class Journal Week 4
- Class Journal Week 5
- Class Journal Week 6
- Class Journal Week 7
- Class Journal Week 8
- Class Journal Week 9
- Class Journal Week 10
- Class Journal Week 11
- Class Journal Week 12
- Class Journal Week 13
- Class Journal Week 14
- Class Journal Week 15
- Kmeilak Week 2
- Kmeilak Week 3
- Kmeilak Week 4
- Kmeilak Week 5
- Kmeilak Week 6
- Kmeilak Week 7
- Kmeilak Week 8
- Kmeilak Week 9
- Kmeilak Week 10
- Kmeilak Week 11
- Kmeilak Week 12
- Kmeilak Week 13
- Kmeilak Week 14
- Kmeilak Week 15
Kmeilak (talk) 21:20, 12 September 2013 (PDT)Kmeilak (talk) 19:46, 12 September 2013 (PDT)
