Difference between revisions of "Ajvree Week 9"

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(Export Information)
(Export Information: import times goa and obo xml)
Line 14: Line 14:
 
GO OBO-XML filename: go_daily-termdb_AJV_2013.obo-xml <br>
 
GO OBO-XML filename: go_daily-termdb_AJV_2013.obo-xml <br>
 
* GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the [http://beta.geneontology.org/page/download-ontology GO Download page] has been unzipped):
 
* GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the [http://beta.geneontology.org/page/download-ontology GO Download page] has been unzipped):
* Time taken to import:
+
* Time taken to import: 6.09 min
* Time taken to process:
+
* Time taken to process: 4.48 min
  
 
GOA filename: 46.V_cholerae_ATCC_39315_AJV_2013.goa<br>
 
GOA filename: 46.V_cholerae_ATCC_39315_AJV_2013.goa<br>
Line 21: Line 21:
 
* GOA version (News on [http://www.ebi.ac.uk/GOA/ this page] records past releases; current information can be found in the Last modified field on the [ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/ FTP site]):<br>
 
* GOA version (News on [http://www.ebi.ac.uk/GOA/ this page] records past releases; current information can be found in the Last modified field on the [ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/ FTP site]):<br>
  
* Time taken to import:
+
* Time taken to import: 0.06 min
  
 
Name of .gdb file:
 
Name of .gdb file:

Revision as of 17:31, 22 October 2013

Export Information

Version of GenMAPP Builder: 2.0b70

Computer on which export was run: front row, second computer from left

Postgres Database name: vc_AJV_20131022_gmb2b70

UniProt XML filename:Uniprotvibriocholera_AJV.xml

  • UniProt XML version (The version information can be found at the UniProt News Page):
  • Time taken to import: 2.87 min

GO OBO-XML filename: go_daily-termdb_AJV_2013.obo-xml

  • GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the GO Download page has been unzipped):
  • Time taken to import: 6.09 min
  • Time taken to process: 4.48 min

GOA filename: 46.V_cholerae_ATCC_39315_AJV_2013.goa
Direct download due to network connectivity errors

  • GOA version (News on this page records past releases; current information can be found in the Last modified field on the FTP site):
  • Time taken to import: 0.06 min

Name of .gdb file:

  • Time taken to export .gdb:
  • Upload your file and link to it here.

Note:



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