Difference between revisions of "Ajvree Week 15"
From LMU BioDB 2013
(excel comparison info) |
(excel comparison info 2) |
||
| Line 1: | Line 1: | ||
==12/3/13== | ==12/3/13== | ||
| − | Comparing gene id's in excel: | + | '''Comparing gene id's in excel:''' |
*first search in xmlmatch: | *first search in xmlmatch: | ||
**searched for SP_[0-9][0-9][0-9][0-9] in uniprot file | **searched for SP_[0-9][0-9][0-9][0-9] in uniprot file | ||
| Line 7: | Line 7: | ||
*saved to text file | *saved to text file | ||
*used match in excel to compare lists | *used match in excel to compare lists | ||
| − | *NO Matches found | + | *link to instructions for excel match comparison found here: [[http://xmlpipedb.sourceforge.net/wiki/index.php/Using_Microsoft_Excel_to_Compare_ID_Lists]] |
| + | *NO Matches found, all results were N/A | ||
| + | *'''Excel File:'''[[Media:20131203_IDExcelcomparison_tATK_TIGR4_AJV.xls|ID Comparison]] | ||
| + | **Out of all 333 Gene ID's, none were found in original XML file, so those errors cannot be fixed | ||
Revision as of 22:17, 4 December 2013
12/3/13
Comparing gene id's in excel:
- first search in xmlmatch:
- searched for SP_[0-9][0-9][0-9][0-9] in uniprot file
- got 2126 match results
- saved to text file
- used match in excel to compare lists
- link to instructions for excel match comparison found here: [[1]]
- NO Matches found, all results were N/A
- Excel File:ID Comparison
- Out of all 333 Gene ID's, none were found in original XML file, so those errors cannot be fixed
