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| | ==Export Information== | | ==Export Information== |
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| − | Version of GenMAPP Builder: 2.0b71 modified and distributed 2013NOV25 and version not yet updated | + | Version of GenMAPP Builder: 2.0b73 |
| | :Database called: tATK_TIGR4_2013NOV25 | | :Database called: tATK_TIGR4_2013NOV25 |
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| | Postgres Database name: tATK_TIGR4_2013NOV25 | | Postgres Database name: tATK_TIGR4_2013NOV25 |
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| − | UniProt XML filename: 20131118_UniProtXML_tATK_TIGR4_TPV.xml | + | UniProt XML filename: [[Media:20131118_UniProtXML_tATK_TIGR4_TPV.xml|20131118_UniProtXML_tATK_TIGR4_TPV.xml]] |
| | * UniProt XML version: UniProt Release 2013_11; 2013Nov13 | | * UniProt XML version: UniProt Release 2013_11; 2013Nov13 |
| | * Time taken to import: 3.15min | | * Time taken to import: 3.15min |
| | | | |
| − | GO OBO-XML filename: 20131120_OBOXML_tATK_TPV.obo-xml | + | GO OBO-XML filename: [[Media:20131120_OBOXML_tATK_TPV.gz|20131120_OBOXML_tATK_TPV.obo-xml]] |
| | * GO OBO-XML version: 2013Nov20 | | * GO OBO-XML version: 2013Nov20 |
| | * Time taken to import: 10.59min | | * Time taken to import: 10.59min |
| | * Time taken to process: 9.25min | | * Time taken to process: 9.25min |
| | | | |
| − | GOA filename: 20131118_GOA_tATK_TIGR4_TPV.goa | + | GOA filename: [[Media:20131118_GOA_tATK_TIGR4_TPV.goa|20131118_GOA_tATK_TIGR4_TPV.goa]] |
| | * GOA version: 2013Nov12 14:49 | | * GOA version: 2013Nov12 14:49 |
| | * Time taken to import: 0.03min | | * Time taken to import: 0.03min |
| | | | |
| − | Name of .gdb file: 20131125_E4_tATK_TIGR4.gdb | + | Name of .gdb file: [[Media:Streptococcus_pneumoniae_TIGR4_20131125.gdb|Streptococcus_pneumoniae_TIGR4_20131125.gdb]] |
| | * Time taken to export .gdb: less than 1 hour | | * Time taken to export .gdb: less than 1 hour |
| | **Started at 22:53 | | **Started at 22:53 |
| | **Finished by 23:50 | | **Finished by 23:50 |
| − | * Upload your file and link to it here. [[Media:20131125_E4_tATK_TIGR4.gdb]] | + | * Upload your file and link to it here. [[Media:Streptococcus_pneumoniae_TIGR4_20131125.gdb|Streptococcus_pneumoniae_TIGR4_20131125.gdb]] |
| | | | |
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Stack trace:
#0 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(480): _DiffEngine->_diag()
#1 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(291): _DiffEngine->_compareseq()
#2 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(175): _DiffEngine->diff_local()
#3 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(653): _DiffEngine->diff()
#4 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(820): Diff->__construct()
#5 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(1240): MappedDiff->__construct()
#6 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(1458): WordLevelDiff->__construct()
#7 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(952): TableDiffFormatter->_changed()
#8 /apps/xmlpipedb/biodb/fall2013/includes/diff/DairikiDiff.php(924): DiffFormatter->_block()
#9 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(765): DiffFormatter->format()
#10 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(655): DifferenceEngine->generateDiffBody()
#11 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(593): DifferenceEngine->getDiffBody()
#12 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(566): DifferenceEngine->getDiff()
#13 /apps/xmlpipedb/biodb/fall2013/includes/diff/DifferenceEngine.php(409): DifferenceEngine->showDiff()
#14 /apps/xmlpipedb/biodb/fall2013/includes/Article.php(725): DifferenceEngine->showDiffPage()
#15 /apps/xmlpipedb/biodb/fall2013/includes/Article.php(478): Article->showDiffPage()
#16 /apps/xmlpipedb/biodb/fall2013/includes/actions/ViewAction.php(37): Article->view()
#17 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(427): ViewAction->show()
#18 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(304): MediaWiki->performAction()
#19 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(536): MediaWiki->performRequest()
#20 /apps/xmlpipedb/biodb/fall2013/includes/Wiki.php(446): MediaWiki->main()
#21 /apps/xmlpipedb/biodb/fall2013/index.php(59): MediaWiki->run()
#22 {main}