Difference between revisions of "Taur.vil Week 3"
From LMU BioDB 2013
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[[Week_3|Week 3 Individual Journal]] | [[Week_3|Week 3 Individual Journal]] | ||
+ | ==Week 2 Correction== | ||
+ | :None were needed | ||
+ | ==Genetic Code by Computer== | ||
+ | ===Complement of a strand=== | ||
+ | cat prokaryote.txt | sed "y/atcg/tagc/" | ||
+ | ===Translating the Genetic Code=== | ||
+ | +1 Frame | ||
+ | cat prokaryote.txt | sed "s/t/u/g" | sed "s/.../& /" | sed -f genetic-code.sed | ||
+ | Produces | ||
+ | S T I F Q - V R W P K K T I L N L K R C L I P C S A Y N P A A S S A G G I L | ||
+ | +2 Frame | ||
+ | cat prokaryote.txt | sed "s/t/u/g" | sed "s/^.//g" | sed "s/.../& /g" | sed -f genetic-code.sed | ||
+ | Produces | ||
+ | L L Y F N R Y D G Q R R Q Y - T - N V A - Y H V P R I T Q P P V P L A A F - | ||
+ | +3 Frame | ||
+ | cat prokaryote.txt | sed "s/t/u/g" | sed "s/^..//g" | sed "s/.../& /g" | sed -f genetic-code.sed | ||
+ | Produces | ||
+ | Y Y I S I G T M A K E D N I E L E T L P N T M F R V - P S R Q F R W R H F N | ||
{{Taur.vil}} | {{Taur.vil}} |
Revision as of 04:49, 13 September 2013
Contents |
Week 2 Correction
- None were needed
Genetic Code by Computer
Complement of a strand
cat prokaryote.txt | sed "y/atcg/tagc/"
Translating the Genetic Code
+1 Frame
cat prokaryote.txt | sed "s/t/u/g" | sed "s/.../& /" | sed -f genetic-code.sed
Produces
S T I F Q - V R W P K K T I L N L K R C L I P C S A Y N P A A S S A G G I L
+2 Frame
cat prokaryote.txt | sed "s/t/u/g" | sed "s/^.//g" | sed "s/.../& /g" | sed -f genetic-code.sed
Produces
L L Y F N R Y D G Q R R Q Y - T - N V A - Y H V P R I T Q P P V P L A A F -
+3 Frame
cat prokaryote.txt | sed "s/t/u/g" | sed "s/^..//g" | sed "s/.../& /g" | sed -f genetic-code.sed
Produces
Y Y I S I G T M A K E D N I E L E T L P N T M F R V - P S R Q F R W R H F N
- As part of Biological Databases
Please Remember the Harassing of Deities is Strictly Prohibited
Never Forget Samson