Difference between revisions of "Kgosch Week 3"
From LMU BioDB 2013
(re-added answer to first problem) |
(added attempt at code for +1 sequence) |
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| Line 5: | Line 5: | ||
cat sequence_file | sed "y/atcg/tagc/" | cat sequence_file | sed "y/atcg/tagc/" | ||
| − | '''Commands for Reading frames:''' | + | '''Commands for Reading frames:(work in progress)''' |
| + | |||
| + | '''+1''' | ||
| + | cat sequence_file | sed "y/t/u/g" | sed "s/.../& /g" | sed -f ~dondi/xmlpipedb/data/genetic-code.sed | ||
== Links == | == Links == | ||
Latest revision as of 19:29, 19 September 2013
cat sequence_file | ?????
Commands for Complement:
cat sequence_file | sed "y/atcg/tagc/"
Commands for Reading frames:(work in progress)
+1
cat sequence_file | sed "y/t/u/g" | sed "s/.../& /g" | sed -f ~dondi/xmlpipedb/data/genetic-code.sed
