Difference between revisions of "Ksherbina Week 5"
From LMU BioDB 2013
(→Steps to Look Up Human EGFR Protein in the UniProt Database: Made an adjustment to step 3. Added step 10.) |
(→Steps to Look Up Human EGFR Protein in the UniProt Database: Altered bullet in #5. Added onto #10.) |
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#Locate the navigation toolbar, which contains links to different section in white in a blue box with rounded corners that spans the page horizontally. | #Locate the navigation toolbar, which contains links to different section in white in a blue box with rounded corners that spans the page horizontally. | ||
#Click on the link "Entry information" to jump to that section. | #Click on the link "Entry information" to jump to that section. | ||
| − | #*This section | + | #*This section contains information regarding Entry name (for quick identification), Accession Number (unique identifier for the protein), Entry history, Entry status, and Annotation program (these headers appear in a vertical column to the left). |
#In the row of this section containing accession number information, click on the gray icon with two arrows pointing in opposite directions to expand the list of secondary accession numbers for the protein. | #In the row of this section containing accession number information, click on the gray icon with two arrows pointing in opposite directions to expand the list of secondary accession numbers for the protein. | ||
#*While the primary accession number should be used to reference a protein, you can search for a secondary accession number if that number is listed in an article that you would like to reference regarding the protein. | #*While the primary accession number should be used to reference a protein, you can search for a secondary accession number if that number is listed in an article that you would like to reference regarding the protein. | ||
| Line 15: | Line 15: | ||
#Click the search button. | #Click the search button. | ||
#*You should be redirected to the page that you were already browsing through. | #*You should be redirected to the page that you were already browsing through. | ||
| − | #Click on the Names navigation link on the navigation tool bar, which should span the top of the current page view horizontally. | + | #Click on the "Names" navigation link on the navigation tool bar, which should span the top of the current page view horizontally. This should take you to a section called "Names and origin". |
| + | #*This section should contains information regarding Protein names, Gene names, Organism, Taxonomic identifier, and Taxonomic lineage. (these headers appear in a vertical column to the left). | ||
[[Category:Journal Entry]] | [[Category:Journal Entry]] | ||
[[Category:Individual Homework]] | [[Category:Individual Homework]] | ||
Revision as of 07:26, 25 September 2013
| Assignment Description | Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 | Week 12 | Week 13 | Week 15 |
| Class Journal | Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | |||||
| Individual Journal | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 |
| Other | Week 5: Database Wiki |
| Final Project | Team H(oo)KD Project Page | Journal Club Presentation | Project Individual Journal |
Steps to Look Up Human EGFR Protein in the UniProt Database
- Go to the UniProt Database.
- Type the UniProt ID P00533 into the Query field in the middle of the page.
- Click the Search button.
- Locate the navigation toolbar, which contains links to different section in white in a blue box with rounded corners that spans the page horizontally.
- Click on the link "Entry information" to jump to that section.
- This section contains information regarding Entry name (for quick identification), Accession Number (unique identifier for the protein), Entry history, Entry status, and Annotation program (these headers appear in a vertical column to the left).
- In the row of this section containing accession number information, click on the gray icon with two arrows pointing in opposite directions to expand the list of secondary accession numbers for the protein.
- While the primary accession number should be used to reference a protein, you can search for a secondary accession number if that number is listed in an article that you would like to reference regarding the protein.
- Scroll back to the top of the page.
- Type the secondary accession number for the protein Q14225 into the Query filed in the middle of the page.
- Click the search button.
- You should be redirected to the page that you were already browsing through.
- Click on the "Names" navigation link on the navigation tool bar, which should span the top of the current page view horizontally. This should take you to a section called "Names and origin".
- This section should contains information regarding Protein names, Gene names, Organism, Taxonomic identifier, and Taxonomic lineage. (these headers appear in a vertical column to the left).
