Difference between revisions of "Laurmagee: Week 9"
From LMU BioDB 2013
(→Export Information) |
(→Export Information: Courtesy logging of times and filenames.) |
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* GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the [http://beta.geneontology.org/page/download-ontology GO Download page] has been unzipped): | * GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the [http://beta.geneontology.org/page/download-ontology GO Download page] has been unzipped): | ||
* Time taken to import:20.02 minutes | * Time taken to import:20.02 minutes | ||
| − | * Time taken to process: | + | * Time taken to process: 14.78 minutes |
| − | GOA filename: | + | GOA filename: 46.V_cholerae_ATCC_39315_10_22_LM_KM.txt |
* GOA version (News on [http://www.ebi.ac.uk/GOA/ this page] records past releases; current information can be found in the Last modified field on the [ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/ FTP site]): | * GOA version (News on [http://www.ebi.ac.uk/GOA/ this page] records past releases; current information can be found in the Last modified field on the [ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/ FTP site]): | ||
| − | * Time taken to import: | + | * Time taken to import: 0.16 minutes |
| − | Name of .gdb file: | + | Name of .gdb file: Vc-Std_20131022_LM_KM-gmb2b70.gdb |
* Time taken to export .gdb: | * Time taken to export .gdb: | ||
* Upload your file and link to it here. | * Upload your file and link to it here. | ||
Note: | Note: | ||
Revision as of 18:15, 22 October 2013
Export Information
Version of GenMAPP Builder:2.0b70
Computer on which export was run: Last row of computer in the lab; second computer from the right when facing the front of the classroom.
Postgres Database name: Vibrio cholerae serotype O1_10_22_LM_KM
UniProt XML filename:File:Vibrio cholerae serotype O1 10 22 LM KM.xml
- UniProt XML version (The version information can be found at the UniProt News Page):
- Time taken to import: 8.49 minutes
GO OBO-XML filename:File:46.V cholerae ATCC 39315 10 22 LM KM.txt
- Direct Download from Wiki due to connectivity problems.
- GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the GO Download page has been unzipped):
- Time taken to import:20.02 minutes
- Time taken to process: 14.78 minutes
GOA filename: 46.V_cholerae_ATCC_39315_10_22_LM_KM.txt
- GOA version (News on this page records past releases; current information can be found in the Last modified field on the FTP site):
- Time taken to import: 0.16 minutes
Name of .gdb file: Vc-Std_20131022_LM_KM-gmb2b70.gdb
- Time taken to export .gdb:
- Upload your file and link to it here.
Note:
