Difference between revisions of "Lena Week 10"

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(Annotated Bibliography)
(microarray data)
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*I used Google Scholar and searched for the keywords "leishmania" and "microarray."  The search turned up 7260 results and at least the first five or so results seemed to be relevant to what I was looking for.  I clicked on the second article from the top which was titled
 
*I used Google Scholar and searched for the keywords "leishmania" and "microarray."  The search turned up 7260 results and at least the first five or so results seemed to be relevant to what I was looking for.  I clicked on the second article from the top which was titled
"Evaluation of differential gene expression in Leishmania major Friedlin procyclics and metacyclics using DNA microarray analysis."
+
"Expression profiling using random genomic DNA microarrays identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major"
*Saxena Alka, Worthey Elizabeth A., Yan Shaofeng, Leland Aaron, Stuart Kenneth D., Myler Peter J. (2003)Evaluation of differential gene expression in Leishmania major Friedlin procyclics and metacyclics using DNA microarray analysis, ''Molecular and Biochemical Parasitology'' '''129''':103-114.
+
*Natalia S Akopyants, Robin S Matlib, Elena N Bukanova, Matthew R Smeds, Bernard H Brownstein, Gary D Stormo, Stephen M Beverley, (2004) Expression profiling using random genomic DNA microarrays identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major, ''Molecular and Biochemical Parasitology'','''136''':71-86
 +
 
 +
 
  
 
*http://www.sciencedirect.com/science/article/pii/S0166685103001002
 
*http://www.sciencedirect.com/science/article/pii/S0166685103001002
 
*[[Media:Leishmania_microarray.pdf]]
 
*[[Media:Leishmania_microarray.pdf]]

Revision as of 17:29, 31 October 2013

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC310692/ : A Physical Map of the Leishmania major Friedlin Genome

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC145848/ : The Leishmania genome comprises 36 chromosomes conserved across widely divergent human pathogenic species.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279888/ : Genomic Organization of Leishmania Species

http://www.ncbi.nlm.nih.gov/pubmed/9196743 : Parasite genome analysis. A global map of the Leishmania major genome: prelude to genomic sequencing.

http://www.ncbi.nlm.nih.gov/pubmed/15500921 : Shotgun optical mapping of the entire Leishmania major Friedlin genome.

http://www.sciencedirect.com/science/article/pii/S0169475898012757 : The Complete Chromosomal Organization of the Reference Strain of the Leishmania Genome Project, L. major `Friedlin'

Contents

Annotated Bibliography

Genome sequencing for leishmania

prospective search

microarray data

  • I used Google Scholar and searched for the keywords "leishmania" and "microarray." The search turned up 7260 results and at least the first five or so results seemed to be relevant to what I was looking for. I clicked on the second article from the top which was titled

"Expression profiling using random genomic DNA microarrays identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major"

  • Natalia S Akopyants, Robin S Matlib, Elena N Bukanova, Matthew R Smeds, Bernard H Brownstein, Gary D Stormo, Stephen M Beverley, (2004) Expression profiling using random genomic DNA microarrays identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major, Molecular and Biochemical Parasitology,136:71-86


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