Difference between revisions of "Streptococcus pneumoniae"

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(doi for genome and microarray)
(Genome Paper)
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Dahlquist, K.D., Salomonis, N., Vranizan, K., Lawlor, S.C., & Conklin, B.R. (2002) GenMAPP, A New Tool for Viewing and Analyzing Microarray Data on Biological Pathways. Nature Genetics 31:19-20.
 
Dahlquist, K.D., Salomonis, N., Vranizan, K., Lawlor, S.C., & Conklin, B.R. (2002) GenMAPP, A New Tool for Viewing and Analyzing Microarray Data on Biological Pathways. Nature Genetics 31:19-20.
JoAnn Hoskins1, William E. Alborn Jr.1, Jeffrey Arnold2, Larry C. Blaszczak1, Stanley Burgett2, Bradley S. DeHoff2, Shawn T. Estrem1, Lori Fritz2, Dong-Jing Fu2, Wendy Fuller2, Chad Geringer2, Raymond Gilmour1, Jennifer S. Glass1, Hamid Khoja1, Angelika R. Kraft1, Robert E. Lagace3, Donald J. LeBlanc1, Linda N. Lee1, Elliot J. Lefkowitz4, Jin Lu1, Patti Matsushima1, Scott M. McAhren2, Margaret McHenney2, Kevin McLeaster2, Christopher W. Mundy2, Thalia I. Nicas1, Franklin H. Norris2, MaryJeanne O'Gara1, Robert B. Peery1, Gregory T. Robertson1, Pamela Rockey2, Pei-Ming Sun1, Malcolm E. Winkler1, Yong Yang1, Michelle Young-Bellido1, Genshi Zhao1, Christopher A. Zook1, Richard H. Baltz1, S. Richard Jaskunas1, Paul R. Rosteck Jr.2, Paul L. Skatrud1, and John I. Glass1,*
+
Hoskins, J., Alborn, W.E. Jr., Arnold, J., Blaszczak, L.C., Burgett, S., Bradley, S., DeHoff, S.T., Estrem, L.F., Fu, D.J., Fuller, W., Geringer, C., Gilmour, R., Glass, J.S., Khoja1, H., Kraft, A.R., Lagace, R.E., LeBlanc, D.J., Lee, L.N., Lefkowitz, E.J., Lu, J., Matsushima, P., McAhren, S.M., McHenney, M., McLeaster, K., Mundy, C.W., Nicas, T.I., Norris, F.H., O'Gara1, M.J., Peery, R.B., Robertson, G.T., Rockey, P., Sun, P.M., Winkler, M.E., Yang, Y., Young-Bellido, M., Zhao, G., Zook, C.A., Baltz, R.H., Jaskunas, S.R., Rosteck Jr., P.R., Skatrud, P.L., and Glass, J.I.*
  
 
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<!-- ===1: Identification of Genes That Contribute to the Pathogenesis of Invasive Pneumococcal Disease by In Vivo Transcriptomic Analysis===

Revision as of 18:01, 5 November 2013

Contents

Papers

Genome Paper

Title: Genome of the Bacterium Streptococcus pneumoniae Strain R6

By Hoskins et al. (2001)
Web link
PDF
Reference: Hoskins, J, Alborn, WE, Arnold, J, Blaszczak, LC, Burgett, S, DeHoff, BS, et al. (2001). Genome of the bacterium Streptococcus pneumoniae strain R6. Journal of Bacteriology, 183(19): 5709-5717. doi: 10.1128/JB.183.19.5709-5717.2001

Dahlquist, K.D., Salomonis, N., Vranizan, K., Lawlor, S.C., & Conklin, B.R. (2002) GenMAPP, A New Tool for Viewing and Analyzing Microarray Data on Biological Pathways. Nature Genetics 31:19-20. Hoskins, J., Alborn, W.E. Jr., Arnold, J., Blaszczak, L.C., Burgett, S., Bradley, S., DeHoff, S.T., Estrem, L.F., Fu, D.J., Fuller, W., Geringer, C., Gilmour, R., Glass, J.S., Khoja1, H., Kraft, A.R., Lagace, R.E., LeBlanc, D.J., Lee, L.N., Lefkowitz, E.J., Lu, J., Matsushima, P., McAhren, S.M., McHenney, M., McLeaster, K., Mundy, C.W., Nicas, T.I., Norris, F.H., O'Gara1, M.J., Peery, R.B., Robertson, G.T., Rockey, P., Sun, P.M., Winkler, M.E., Yang, Y., Young-Bellido, M., Zhao, G., Zook, C.A., Baltz, R.H., Jaskunas, S.R., Rosteck Jr., P.R., Skatrud, P.L., and Glass, J.I.*


Microarray Paper

Sanchez et. al. 2011

Streptococcus pneumoniae in Biofilms Are Unable to Cause Invasive Disease Due to Altered Virulence Determinant Production
Web Link: Biofilm paper
PDF: Media:Biofilms_paper.pdf
Data at: GEO link
Experiments Performed: Examined genes related to biofilm formation of Streptococcus pneumoniae
Replicates: 3 biological replicates, 3+ technical replicates
Reference: Sanchez CJ, Kumar N, Lizcano A, Shivshankar P, Dunning Hotopp JC, et al. (2011) Streptococcus pneumoniae in Biofilms Are Unable to Cause Invasive Disease Due to Altered Virulence Determinant Production. PLoS ONE 6(12): e28738. doi:10.1371/journal.pone.0028738
Found by Kevin

Team

Team Leader: Tauras


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