Difference between revisions of "Kevinmcgee Week 13"

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(Added info to journal)
Line 3: Line 3:
 
##Created a column next to dye swap chips and did the formula:  
 
##Created a column next to dye swap chips and did the formula:  
 
  =-1*(dye swap chip column)
 
  =-1*(dye swap chip column)
 +
#looked for background information in the array paper
 +
##L. infantum MHOM/MA/67/ITMAP-263 and L. major LV39 MRHO/SU/59/P strains used in this study
 +
##All microarray data will be freely available on the Geo NCBI database in the MIAME format
 +
##*The series accession number for our manuscript is GSE10407.
 +
##Each chip compares promastigote vs. amastigote with different replicates

Revision as of 18:31, 19 November 2013

  1. Opened L.infantumCompliedRawData(A).txt
  2. Finished the formatting by flipping the dye swap chips negative
    1. Created a column next to dye swap chips and did the formula:
=-1*(dye swap chip column)
  1. looked for background information in the array paper
    1. L. infantum MHOM/MA/67/ITMAP-263 and L. major LV39 MRHO/SU/59/P strains used in this study
    2. All microarray data will be freely available on the Geo NCBI database in the MIAME format
      • The series accession number for our manuscript is GSE10407.
    3. Each chip compares promastigote vs. amastigote with different replicates
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