Difference between revisions of "Leishmania major Week 13 Status Report"
From LMU BioDB 2013
(→Import/Export GenMAPP) |
(→Lena Hunt) |
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==Reflections== | ==Reflections== | ||
===[[User:Lena|Lena Hunt]]=== | ===[[User:Lena|Lena Hunt]]=== | ||
| + | 1.)We got our database to export into GenMAPP. Originally it was showing a generic database, and it wouldn't recognize the OrderedLocusNames. We fixed it in Eclipse and uploaded it to the homepage. We then ran GenMapp successfully. | ||
| + | 2.) | ||
| + | 3.) | ||
==GenMAPP Data== | ==GenMAPP Data== | ||
Revision as of 18:14, 21 November 2013
Contents |
Import/Export GenMAPP
Name:Leishmania_major_18112013
Export Information
- Uniprot: 7.42 minutes
- File:UniprotXML Leishmania 05112013 Gabe Lena.xml
- GO OBO: 5.96 minutes
- File:Leishmania 05112013 Gabe Lena.obo-xml.gz
- GOA: 0.04 minutes
- File:LeishmaniaGOA 19112013 Lena Gabe.goa
Tally Engine
Original Row Counts Comparison
Reflections
Lena Hunt
1.)We got our database to export into GenMAPP. Originally it was showing a generic database, and it wouldn't recognize the OrderedLocusNames. We fixed it in Eclipse and uploaded it to the homepage. We then ran GenMapp successfully. 2.) 3.)
GenMAPP Data
- Adjusted the dye swaps
- renamed the samples and compiled the microarray data or each species.
- Data now ready for statistical analysis
