Difference between revisions of "Gleis Week 14"

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(Status Report)
(Status Report)
Line 15: Line 15:
 
:[[Media:Leishmania GDBexport complete 26112013.PNG]]
 
:[[Media:Leishmania GDBexport complete 26112013.PNG]]
 
*No errors appear to be present in export
 
*No errors appear to be present in export
 +
*Tallyengine and postgres reported 8355 ORF IDs
 +
*Access reports 8354 Ordered Locus Names

Revision as of 22:04, 26 November 2013

To Do List

  • Identify new URL pattern??
  • Finish export and upload microarray data

Status Report

  • Began new export
  • Used postgres and TallyEngine to ensure proper database version
  • Postgres identified geneID formatting and exceptions:
Media:SQL Query ResultsandIDPattern Leishmania.PNG
  • Five exceptions found- identify if relevant
  • Export Status update @ 67%
  • Screenshot of command prompt @ 67% of export
Media:Leishmania GDBexport status 67percent.PNG
  • Export to GenMAPP finished
  • Screenshot of command prompt at finish
Media:Leishmania GDBexport complete 26112013.PNG
  • No errors appear to be present in export
  • Tallyengine and postgres reported 8355 ORF IDs
  • Access reports 8354 Ordered Locus Names
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