Difference between revisions of "Team H(oo)KD Final Project Deliverables"
From LMU BioDB 2013
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*Processed and analyzed DNA microarray dataset (.xls): | *Processed and analyzed DNA microarray dataset (.xls): | ||
*GenMAPP Expression Dataset file (.gex): | *GenMAPP Expression Dataset file (.gex): | ||
| − | :*For data collected in absence of rifampicin: | + | :*For data collected in absence of rifampicin: [[Media: For GenMAPP Chlamydia V4 20131205 KS.gex|For GenMAPP absence of Rifampicin]] |
:*For data collected in presence of rifampicin: [[Media:For GenMAPP Chlamydia V4 20131212 KS Presence of Rifampicin.gex|For_GenMAPP Chlamydia_V4_20131212_KS_Presence_of_Rifampicin.gex]] | :*For data collected in presence of rifampicin: [[Media:For GenMAPP Chlamydia V4 20131212 KS Presence of Rifampicin.gex|For_GenMAPP Chlamydia_V4_20131212_KS_Presence_of_Rifampicin.gex]] | ||
*Filtered MAPPFinder Results (.xls): | *Filtered MAPPFinder Results (.xls): | ||
Revision as of 00:16, 14 December 2013
| Project Manager/Coder: Katrina Sherbina | Quality Assurance: Hilda Delgadillo | GenMAPP User: Dillon Williams |
| Project Guidelines: | Gene Database Project | Report Guidelines | |
| Team Journal Assignments | Week 12 Status Report | Week 13 Status Report | Week 15 Status Report |
| Individual Status Reports: | HDelgadi Project Notebook | dwilliams Project Notebook | Ksherbina Project Notebook |
| Useful Links: | Class Page | Team Home Page |
| Final Product | Project Deliverables |
Deliverables
- Gene database for Chlamydia trachomatis A/HAR-13 (.gdb): Ct-Std_External_20131121.gdb
- ReadMe file including the gene database schema:
- Gene database testing report: Ct_External_20131121_Gene_Database_Testing_Report.pdf
- Processed and analyzed DNA microarray dataset (.xls):
- GenMAPP Expression Dataset file (.gex):
- For data collected in absence of rifampicin: For GenMAPP absence of Rifampicin
- For data collected in presence of rifampicin: For_GenMAPP Chlamydia_V4_20131212_KS_Presence_of_Rifampicin.gex
- Filtered MAPPFinder Results (.xls):
- Sample MAPP file of a relevant biological pathway for your species (.mapp):
- Picture of the MAPP (.jpeg):
- Group Report (.pdf):
- PowerPoint presentation (given on Thursday, December 12):
