Difference between revisions of "KSherbina Week 3"
From LMU BioDB 2013
(Added category.) |
(Recorded the piped text used to find the complement of a strand.) |
||
| Line 1: | Line 1: | ||
{{Ksherbina}} | {{Ksherbina}} | ||
| + | |||
| + | ==The Genetic Code, by Computer== | ||
| + | |||
| + | ===Complement of a Strand=== | ||
| + | |||
| + | To find the complementary strand of the sequence in the file ''prokaryote.txt'', the following sequence of piped text was executed | ||
| + | cat prokaryote.txt | sed "y/atcg/tagc/" | ||
| + | |||
<!--To find a pattern within text : grep "^A....T" hs_ref_GRCh37_chr19.fa--> | <!--To find a pattern within text : grep "^A....T" hs_ref_GRCh37_chr19.fa--> | ||
Revision as of 00:24, 13 September 2013
| Assignment Description | Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 | Week 12 | Week 13 | Week 15 |
| Class Journal | Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | |||||
| Individual Journal | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 |
| Other | Week 5: Database Wiki |
| Final Project | Team H(oo)KD Project Page | Journal Club Presentation | Project Individual Journal |
The Genetic Code, by Computer
Complement of a Strand
To find the complementary strand of the sequence in the file prokaryote.txt, the following sequence of piped text was executed
cat prokaryote.txt | sed "y/atcg/tagc/"
