Difference between revisions of "Ksherbina Week 9"
From LMU BioDB 2013
(→Lab Notebook: Added information about what additional programs were downloaded onto my personal computer) |
(→Export Information: Edited the UniProt XML file information) |
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| Line 9: | Line 9: | ||
Postgres Database name: VC_KS_20131022_gmb2b70 | Postgres Database name: VC_KS_20131022_gmb2b70 | ||
| − | UniProt XML filename: | + | UniProt XML filename: UniProt_V_cholerae_KSTV_20131022 |
| − | * UniProt XML version (The version information can be found at [http://uniprot.org/news the UniProt News Page]): | + | * UniProt XML version (The version information can be found at [http://uniprot.org/news the UniProt News Page]): UniProt release 2013_10 |
* Time taken to import: 5.33 minutes | * Time taken to import: 5.33 minutes | ||
Revision as of 19:06, 22 October 2013
| Assignment Description | Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 | Week 12 | Week 13 | Week 15 |
| Class Journal | Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | |||||
| Individual Journal | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 | Week 8 | Week 9 | Week 10 | Week 11 |
| Other | Week 5: Database Wiki |
| Final Project | Team H(oo)KD Project Page | Journal Club Presentation | Project Individual Journal |
Export Information
Version of GenMAPP Builder:
Computer on which export was run:
Postgres Database name: VC_KS_20131022_gmb2b70
UniProt XML filename: UniProt_V_cholerae_KSTV_20131022
- UniProt XML version (The version information can be found at the UniProt News Page): UniProt release 2013_10
- Time taken to import: 5.33 minutes
GO OBO-XML filename: go_daily-termdb_KS_20131022.obo-xml
- GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the GO Download page has been unzipped):
- Time taken to import:
- Time taken to process:
GOA filename:
- GOA version (News on this page records past releases; current information can be found in the Last modified field on the FTP site):
- Time taken to import:
Name of .gdb file:
- Time taken to export .gdb:
- Upload your file and link to it here.
Note:
Lab Notebook
- Download GenMAPP Builder 2.0b70 from http://sourceforge.net/projects/xmlpipedb/files/GenMAPP%20Builder/
- Download XMLPipeDB Utilities 2.3.1 from http://sourceforge.net/projects/xmlpipedb/files/
