Difference between revisions of "Taur.vil Week 10"

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(Finding other papers: details on paper 1)
(Finding other papers)
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#Searched within results for microarray (56 results)
 
#Searched within results for microarray (56 results)
 
#Selected the third option Title: "Identification of Genes That Contribute to the Pathogenesis of Invasive Pneumococcal Disease by In Vivo Transcriptomic Analysis" ([http://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=Refine&qid=4&SID=4FpPeeam4xp5wvHIYs3&page=1&doc=3 link])
 
#Selected the third option Title: "Identification of Genes That Contribute to the Pathogenesis of Invasive Pneumococcal Disease by In Vivo Transcriptomic Analysis" ([http://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=Refine&qid=4&SID=4FpPeeam4xp5wvHIYs3&page=1&doc=3 link])
#*Clicked on links, found in [http://www.ncbi.nlm.nih.gov/pmc/?cmd=Search&term=22778095%5Bpmid%5D PubMed Central], and downloaded [[Media:Article1.pdf|pdf]]. The full article is also available online at [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3418729/?report=classic] and the data is accessible at [http://bugs.sgul.ac.uk/bugsbase/tabs/experiment.php?expt_id=305&action=view&l=a]
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#*Clicked on links, found in [http://www.ncbi.nlm.nih.gov/pmc/?cmd=Search&term=22778095%5Bpmid%5D PubMed Central], and downloaded [[Media:Article1.pdf|pdf]]. The full article is also available online at [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3418729/?report=classic] and the data is accessible at [http://bugs.sgul.ac.uk/bugsbase/tabs/experiment.php?expt_id=305&action=view&l=a].
 
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{{Taur.vil}}
 
{{Taur.vil}}

Revision as of 17:30, 31 October 2013

Week 9 Individual Journal


Lab Journal

Finding Reference Paper

  1. Used PubMed and searched "Streptococcus pneumoniae" & "whole genome" & sequence to find microarray papers
  2. With Kevin Meilak, found [1]
    • In the paper, identified strain R6 (accession no. NC_003098) as the reference sequence
  3. Searched in UniProt for complete genome taxonomies containing Streptococcus pneumoniae and R6 (search results)
  4. Found corresponding link in PubMed (link) and followed links to the original paper (link, PDF)

Finding other papers

  1. In web of science, searched for "Streptococcus pneumoniae strain R6" under title and Hoskins in author to find the reference paper search
  2. Only the reference paper appeared, and looked at the times cited (412 results)
  3. Searched within results for microarray (56 results)
  4. Selected the third option Title: "Identification of Genes That Contribute to the Pathogenesis of Invasive Pneumococcal Disease by In Vivo Transcriptomic Analysis" (link)
    • Clicked on links, found in PubMed Central, and downloaded pdf. The full article is also available online at [2] and the data is accessible at [3].

By Tauras Vilgalys

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