Difference between revisions of "Ajvree Week 12"
From LMU BioDB 2013
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After finding identical results for R6 and G54 files, realized that R6 file was actually for the G54 strain. Checked a few times (reopened files multiple times to confirm) | After finding identical results for R6 and G54 files, realized that R6 file was actually for the G54 strain. Checked a few times (reopened files multiple times to confirm) | ||
| + | |||
| + | First try on Tally Engine for TIGR4:<br> | ||
| + | XML Count:<br> | ||
| + | orderedlocus: 2127<br> | ||
| + | refseq: 2106<br><br> | ||
| + | |||
| + | Database Count:<br> | ||
| + | ordered locus: 3831<br> | ||
| + | refseq: 3403 | ||
Revision as of 18:46, 14 November 2013
Export Counting: -open Access, open file (remember to change all to all files) TIGR4 file:
- ids used: SP_####
- orderedlocusnames count total: 2126 entries
R6 file:
- orderedlocusnames count total: 2115 entries
- ids used: SPG_####
G54 file:
- ids used: SPG_####
- orderedlocusnames count total: 2115 entries
After finding identical results for R6 and G54 files, realized that R6 file was actually for the G54 strain. Checked a few times (reopened files multiple times to confirm)
First try on Tally Engine for TIGR4:
XML Count:
orderedlocus: 2127
refseq: 2106
Database Count:
ordered locus: 3831
refseq: 3403
