Leishmania major Week 13 Status Report

Import/Export GenMAPP

Name:Leishmania_major_18112013

Export Information

Uniprot: 7.42 minutes

File:UniprotXML Leishmania 05112013 Gabe Lena.xml

GO OBO: 5.96 minutes

File:Leishmania 05112013 Gabe Lena.obo-xml.gz

GOA: 0.04 minutes

File:LeishmaniaGOA 19112013 Lena Gabe.goa

Reflections

Lena Hunt

1.)We got our database to export into GenMAPP. Originally it was showing a generic database, and it wouldn't recognize the OrderedLocusNames. We fixed it in Eclipse and uploaded it to the homepage. We then ran GenMapp successfully. We also updated our microarray data so that the gene IDs did not have extra numbers (we used the : as a separator.) We then went through and changed all the "Error" messages with a 0 so as not to confuse GenMAPP.

2.)

3.)

GenMAPP Data

1. Adjusted the dye swaps
2. renamed the samples and compiled the microarray data or each species.
3. Data now ready for statistical analysis