Individual hw week 8
part 1 text file
Media:Merrell Compiled Raw Data Vibrio MPM.txt
Part 1 excel file
Media:Merrell_Compiled_Raw_Data_Vibrio_MPM.xls
948 results
During this lab I mapped the increased expression on the 2009 gene database. For some reason in the beginning of this assignment my .txt file did not want to load so I used my partner's
the top 10 gene ontology terms were
1.Protein folding
2.Chorismate metabolic process
3.aromatic amino acid biosynthesis process
4. cytoplasm
5.protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
6.solute:hydrogen symporter activity
7.sugar:hydrogen symporter activity
8.cation:sugar symporter activity
9.phosphoenolpyruvate-dependent sugar phosphotransferase system
10.zinc ion binding
When I compared my list to stephen's it was apparent that they were different. I believe that this difference arises from the different versions of the data that we used. Mine was from 2009 and his was from 2010.
Media:Increased_MPM-Criterion1-GO.txt
Media:Merrell_Compiled_Raw_Data_Vibrio_SL_10102013.gex
Media:MAPPFinder_GO.txt_excel_file_MPM.xls
Media:Merrell_Compiled_Raw_Data_Vibrio_SL_10102013.EX.txt
Media:Merrell_Compiled_Raw_Data_Vibrio_SL_10102013.gmf
