Lena Week 10

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC310692/ : A Physical Map of the Leishmania major Friedlin Genome

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC145848/ : The Leishmania genome comprises 36 chromosomes conserved across widely divergent human pathogenic species.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279888/ : Genomic Organization of Leishmania Species

http://www.ncbi.nlm.nih.gov/pubmed/9196743 : Parasite genome analysis. A global map of the Leishmania major genome: prelude to genomic sequencing.

http://www.ncbi.nlm.nih.gov/pubmed/15500921 : Shotgun optical mapping of the entire Leishmania major Friedlin genome.

http://www.sciencedirect.com/science/article/pii/S0169475898012757 : The Complete Chromosomal Organization of the Reference Strain of the Leishmania Genome Project, L. major `Friedlin'

Annotated Bibliography

microarray data

• I used the arrayexpress search to look for the species leishmania major. There were 12 experiments found, but only 5 were transcription profiling by array. For the first two, I could not find articles to go with the data, but the third experiment did have a published paper. The title was...

"Expression profiling using random genomic DNA microarrays identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major"

• Natalia S Akopyants, Robin S Matlib, Elena N Bukanova, Matthew R Smeds, Bernard H Brownstein, Gary D Stormo, Stephen M Beverley, (2004) Expression profiling using random genomic DNA microarrays identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major, Molecular and Biochemical Parasitology,136:71-86

• http://www.sciencedirect.com/science/article/pii/S0166685103001002
• Media:Leishmania_microarray.pdf