KSherbina Week 2

Katrina Sherbina

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Assignment Description

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Week 2 Individual Journal Assignment

• Given strand of DNA (top strand):

5'-cgtatgctaataccatgttccgcgtataacccagccgccagttccgctggcggcatttta-3'

Complementary strand of DNA (bottom strand):

3'-gcatacgattatggtacaaggcgcatattgggtcggcggtcaaggcgaccgccgtaaaat-5'

• The 6 possible reading frame:

+1 cgu aug cua aua cca ugu ucc gcg uau aac cca gcc gcc agu ucc gcu ggc ggc auu uua
+2 gua ugc uaa uac cau guu ccg cgu aua acc cag ccg cca guu ccg cug gcg gca uuu 
+3 uau gcu aau acc aug uuc cgc gua uaa ccc agc cgc cag uuc cgc ugg cgg cau uuu
-1 uaa aau gcc gcc agc gga acu ggc ggc ugg guu aua cgc gga aca ugg uau uag cau 
-2 aaa aug ccg cca gcg gaa cug gcg gcu ggg uua uac gcg gaa cau ggu auu agc aua 
-3 aaa ugc cgc cag cgg aac ugg cgg cug ggu uau acg cgg aac aug gua uua gca uac 

Corresponding amino acid sequences:

+1 RMLIPCSAYNPAASSAGGIL 
+2 VCStopYHVPRITQPPVPLAAF
+3 YANTMFRVStopPSRQFRWRHF 
-1 StopNAASGTGGWVIRGTWYStopH 
-2 KMPPAELAAGLYAEHGISI
-3 KCRQRNWRLGYTRNMVLAY