Ajvree Week 4
From LMU BioDB 2013
Class Notes: [ct] at [at] at
[ct] :this can be c or t [at] :this can be a or t
convert week 2 assignment to computer code by "counting" commands bracket notation means find x "or" x
-10 cat infA-E.coli-K12.txt | sed "s/[ct]at[at]at/ HERE /g" to find 2 HERE's
!! = rerun the command
HERE!! = HERE + rerun command \ between exclamation points = put no importance to the exclamation points/ignore command
to add -35 spot, add another sed command
to add -10 or -35 box: <minus35box>&</minus35box> etc sed format doesn't know what slash is, must put another backslash before it <minus35box>&<\/minus35box>