Sinorhizobium meliloti

Team 4

Main Paper: The composite genome of the legume symbiont Sinorhizobium meliloti. Science 293, 668–672.

Personnel

Stephen Louie

Project Manager, Quality Assurance

slouie4 at lion.lmu.edu

1 LMU Drive MSB 5194

Los Angeles, CA 90045

Lauren Magee

GenMAPP Expert

lmagee1 at lion.lmu.edu

1 LMU Drive MSB-5258,

Los Angeles, CA 90045

Mitchell Petredis

Coding Supervisor

mrpetredis at gmail dot com

mpetredi at lion dot lmu dot edu

Loyola Marymount University

1 LMU Drive MSB-5957

Los Angeles, CA 90045-2659

Miles Malefyt

GenMAPP Coordinator

milesm@malefyt.com

mmalefyt@lion.lmu.edu

8416 Campion drive

Westchester, CA 90045

cell: 831-236-5402

Mmalefyt (talk) 10:31, 31 October 2013 (PDT)

Micro Array papers

• [Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression.]

• [Development of a lab-made microarray for analyzing the genetic diversity of nitrogen fixing symbionts Sinorhizobium meliloti and Sinorhizobium medicae.]

• Dual RpoH sigma factors
  • http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-36186/?keywords=&organism=Sinorhizobium+meliloti&array=&exptype[]=&exptype[]=

• Osmotic upshift elicited by salt and sucrose
  • http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-785/?keywords=&organism=Sinorhizobium%20meliloti&array=&exptype[0]=&exptype[1]=&sortby=type&sortorder=ascending

• Expression in nitrogen stress response between wild and mutant types under high and low nitrogen availability
  • http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43570/?keywords=&organism=Sinorhizobium%20meliloti&array=&exptype[0]=&exptype[1]=&sortby=type&sortorder=ascending

• [Development of a lab-made microarray for analyzing the genetic diversity of nitrogen fixing symbionts Sinorhizobium meliloti and Sinorhizobium medicae]

• [A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti]

More microarray papers can be found at mpetredi Week 10