Team Name

Species: Sinorhizobium Meliloti (Strain 1021)

Personnel

Stephen Louie

Project Manager, Quality Assurance

slouie4 at lion.lmu.edu

1 LMU Drive MSB 5194

Los Angeles, CA 90045

Lauren Magee

GenMAPP Expert

lmagee1 at lion.lmu.edu

1 LMU Drive MSB-5258,

Los Angeles, CA 90045

Mitchell Petredis

Coding Supervisor

mrpetredis at gmail dot com

mpetredi at lion dot lmu dot edu

Loyola Marymount University

1 LMU Drive MSB-5957

Los Angeles, CA 90045-2659

Miles Malefyt

GenMAPP Coordinator

milesm@malefyt.com

mmalefyt@lion.lmu.edu

8416 Campion drive

Westchester, CA 90045

cell: 831-236-5402

Mmalefyt (talk) 10:31, 31 October 2013 (PDT)

Micro Array paper

[Osmotic upshift elicited by salt and sucrose]

• [HTML version]
• [PDF version]

Domínguez-Ferreras, A., Pérez-Arnedo, R., Becker, A., Olivares, J., Soto, M.J., Sanjuán, J. (2006) Transcriptome Profiling Reveals the Importance of Plasmid pSymB for Osmoadaptation of Sinorhizobium meliloti Journal of Bacteriology 188:7617-7625

Genome Paper

The composite genome of the legume symbiont Sinorhizobium meliloti. Science 293, 668–672.

Galibert, F., Finan, T.M., Long, S., Puhler, A., et al. (2001) The composite genome of the legume symbiont Sinorhizobium meliloti Science 293:668-672

Important Files

• UniProt XML from 11/5/2013
• GO-OBO XML from 11/5/2013
• GOA file from 11/7/2013
  • From Running GenMAPP Builder page, clicked on the UniProt-GOA Downloads link.
  • Was given an error message. Changed url from "ftp" to "http" at beginning.
  • Was entered, was taken to Index of/pub/database/GO/goa
  • Clicked on "proteomes" folder
  • Directed to Index of /pub/databases/GO/goa/proteomes. Downloaded 58.R_meliloti.goa
    • Note: R. meliloti is an alternative name to S. Melitoti.