https://xmlpipedb.lmucs.io/biodb/fall2015/index.php?action=history&feed=atom&title=Kevin_Wyllie_Week_11
Kevin Wyllie Week 11 - Revision history
2026-06-07T19:48:35Z
Revision history for this page on the wiki
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https://xmlpipedb.lmucs.io/biodb/fall2015/index.php?title=Kevin_Wyllie_Week_11&diff=6488&oldid=prev
Kwyllie: Added the microarray flowchart (yes, I know this is late, although I did upload the file on time!)
2015-11-17T19:53:54Z
<p>Added the microarray flowchart (yes, I know this is late, although I did upload the file on time!)</p>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 19:53, 17 November 2015</td>
</tr><tr><td colspan="2" class="diff-lineno" id="L136" >Line 136:</td>
<td colspan="2" class="diff-lineno">Line 136:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Figure 7B shows persister fraction for D2 biofilms treated with either tobramycin or tobramycin plus the succinate dehydrogenase inhibitor, 2-thenoyltrifluoroacetone. Addition of the inhibitor brought about a significant decrease in persister fraction.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Figure 7B shows persister fraction for D2 biofilms treated with either tobramycin or tobramycin plus the succinate dehydrogenase inhibitor, 2-thenoyltrifluoroacetone. Addition of the inhibitor brought about a significant decrease in persister fraction.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Table 5 shows the fold changes of several pertinent genes (involved in the glyoxylate shunt, TCA cycle, oxidative phosphorylation, NAD(P)H production, and response to oxidative stress) from the microarray analysis, along with the RT-PCR results for the 11 genes tested. The results suggest that pathways responsible for ROS production were downregulated in response to tobramycin exposure.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Table 5 shows the fold changes of several pertinent genes (involved in the glyoxylate shunt, TCA cycle, oxidative phosphorylation, NAD(P)H production, and response to oxidative stress) from the microarray analysis, along with the RT-PCR results for the 11 genes tested. The results suggest that pathways responsible for ROS production were downregulated in response to tobramycin exposure.</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">=== Microarray Methods Flowchart ===</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">[[file: KWVPMethoddiagram.jpg|thumb|center]]</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=== Previous Studies ===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=== Previous Studies ===</div></td></tr>
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Kwyllie
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