https://xmlpipedb.lmucs.io/biodb/fall2015/index.php?action=history&feed=atom&title=Troque_Week_2Troque Week 2 - Revision history2026-06-07T23:51:16ZRevision history for this page on the wikiMediaWiki 1.25.1https://xmlpipedb.lmucs.io/biodb/fall2015/index.php?title=Troque_Week_2&diff=1467&oldid=prevTroque: Added one more sentence to finding frames for -1, -2, and -32015-09-21T21:15:12Z<p>Added one more sentence to finding frames for -1, -2, and -3</p>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 21:15, 21 September 2015</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>             Y  A  N  T  M  F  R  V  Stop P  S  R  Q  F  R  W  R  H  F</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>             Y  A  N  T  M  F  R  V  Stop P  S  R  Q  F  R  W  R  H  F</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Translating mRNA to amino acid sequences using -1, -2, and -3 reading frames uses a similar process to what was described above. The only difference is that since we are looking at the complementary mRNA strand (whose direction is would be 3' to 5'), we have to reverse the strand so that the direction is 5' to 3'. Then, the -1 reading frame is the same as +1, and -2 and -3 are read the same as +2 and +3 respectively.</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Translating mRNA to amino acid sequences using -1, -2, and -3 reading frames uses a similar process to what was described above. The only difference is that since we are looking at the complementary mRNA strand (whose direction is would be 3' to 5'), we have to reverse the strand so that the direction is 5' to 3' <ins class="diffchange diffchange-inline">and finding the complementary of the resulting strand</ins>. Then, the -1 reading frame is the same as +1, and -2 and -3 are read the same as +2 and +3 respectively.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Below are the bottom strands for the mRNA and the amino acid sequence:</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Below are the bottom strands for the mRNA and the amino acid sequence:</div></td></tr>
</table>Troque
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#0 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(544): DiffEngine->diag()
#1 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(344): DiffEngine->compareSeq()
#2 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(227): DiffEngine->diffLocal()
#3 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(721): DiffEngine->diff()
#4 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(886): Diff->__construct()
#5 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(802): DifferenceEngine->generateTextDiffBody()
#6 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(733): DifferenceEngine->generateContentDiffBody()
#7 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(662): DifferenceEngine->getDiffBody()
#8 /apps/xmlpipedb/biodb/fall2015/includes/FeedUtils.php(155): DifferenceEngine->getDiff()
#9 /apps/xmlpipedb/biodb/fall2015/includes/actions/HistoryAction.php(325): FeedUtils::formatDiffRow()
#10 /apps/xmlpipedb/biodb/fall2015/includes/actions/HistoryAction.php(290): HistoryAction->feedItem()
#11 /apps/xmlpipedb/biodb/fall2015/includes/actions/HistoryAction.php(130): HistoryAction->feed()
#12 /apps/xmlpipedb/biodb/fall2015/includes/actions/FormlessAction.php(43): HistoryAction->onView()
#13 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(395): FormlessAction->show()
#14 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(273): MediaWiki->performAction()
#15 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(566): MediaWiki->performRequest()
#16 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(414): MediaWiki->main()
#17 /apps/xmlpipedb/biodb/fall2015/index.php(44): MediaWiki->run()
#18 {main}