# Visit the [https://github.com/lmu-bioinformatics/xmlpipedb/releases XMLPipeDB releases page on GitHub].

# Visit the [https://github.com/lmu-bioinformatics/xmlpipedb/releases XMLPipeDB releases page on GitHub].

#* [https://github.com/lmu-bioinformatics/xmlpipedb/releases/download/untagged-bd04fffc4da853fedf30/gmbuilder-3.0.0-build-5.zip Download gmbuilder-3.0.0-build-5.zip].

#* [https://github.com/lmu-bioinformatics/xmlpipedb/releases/download/gmbuilder-3.0.0-build-5/gmbuilder-3.0.0-build-5.zip Download gmbuilder-3.0.0-build-5.zip].

# Extract the GenMAPP Builder folder using [http://www.7-zip.org/ 7-zip] or other utility.

# Extract the GenMAPP Builder folder using [http://www.7-zip.org/ 7-zip] or other utility.

#* We suggest that you move the extracted folder to the "T:" drive on the computers in Seaver 120.  This folder is a "Thawspace", the contents of which will not be deleted by the program Deep Freeze when the computer is restarted.

#* We suggest that you move the extracted folder to the "T:" drive on the computers in Seaver 120.  This folder is a "Thawspace", the contents of which will not be deleted by the program Deep Freeze when the computer is restarted.

** Navigate to the UniProt XML file that you extracted previously and click the Open button.

** Navigate to the UniProt XML file that you extracted previously and click the Open button.

** This should take about 5-10 minutes, but may take longer depending on the size of the file, processor speed, and available memory of the machine.  When the process has completed, record the elapsed time from the message window that appears.

** This should take about 5-10 minutes, but may take longer depending on the size of the file, processor speed, and available memory of the machine.  When the process has completed, record the elapsed time from the message window that appears.

* Select File > Import GO OBO-XML...

* Select File > Import GO OBO-XML...

** Navigate to the GO OBO-XML file that you extracted previously.  Click the Open button.

** Navigate to the GO OBO-XML file that you extracted previously.  Click the Open button.

** This should take about 5-10 minutes, but may take longer depending on the size of the file, processor speed, and available memory of the machine.  When the process has completed, record the elapsed time from the message window that appears.

** This should take about 5-10 minutes, but may take longer depending on the size of the file, processor speed, and available memory of the machine.  When the process has completed, record the elapsed time from the message window that appears.

* Click OK to the message asking you to process the GO data.

**6.88 min

Click OK to the message asking you to process the GO data.

** This should take about 5-10 minutes, but may take longer depending on the size of the file, processor speed, and available memory of the machine.  When the process has completed, record the elapsed time from the message window that appears.

** This should take about 5-10 minutes, but may take longer depending on the size of the file, processor speed, and available memory of the machine.  When the process has completed, record the elapsed time from the message window that appears.

* Select File > Import GOA...

* Select File > Import GOA...

** Navigate to the GOA file that you downloaded previously and click the Import button.  This process should only take a minute or so.

** Navigate to the GOA file that you downloaded previously and click the Import button.  This process should only take a minute or so.

== Exporting a GenMAPP Gene Database (.gdb) ==

== Exporting a GenMAPP Gene Database (.gdb) ==

** When doing the individual exercise for the [[Week 9]] assignment, use your own name.  When doing this for your team project, use your team's name.

** When doing the individual exercise for the [[Week 9]] assignment, use your own name.  When doing this for your team project, use your team's name.

* GenMAPP Builder scans your PostgreSQL database to see what species are available.  Click on the species that you would like to export, then click ''Next'' to continue.

* GenMAPP Builder scans your PostgreSQL database to see what species are available.  Click on the species that you would like to export, then click ''Next'' to continue.