Difference between revisions of "Troque Week 15"
From LMU BioDB 2015
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* GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the [http://beta.geneontology.org/page/download-ontology GO Download page] has been unzipped): '''Version created on 11/19/2015 (at 2:24 AM)''' | * GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the [http://beta.geneontology.org/page/download-ontology GO Download page] has been unzipped): '''Version created on 11/19/2015 (at 2:24 AM)''' | ||
* GO OBO-XML download link: '''[http://archive.geneontology.org/latest-termdb/go_daily-termdb.obo-xml.gz Click here to download].''' | * GO OBO-XML download link: '''[http://archive.geneontology.org/latest-termdb/go_daily-termdb.obo-xml.gz Click here to download].''' | ||
| − | * Time taken to import: ''' minutes''' | + | * Time taken to import: '''6.84 minutes''' |
| − | * Time taken to process: ''' minutes''' | + | * Time taken to process: '''5.49 minutes''' |
** Note: | ** Note: | ||
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* GOA version (News on [http://www.ebi.ac.uk/GOA/ this page] records past releases; current information can be found in the Last modified field on the [ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/ FTP site]): '''Version released on .''' | * GOA version (News on [http://www.ebi.ac.uk/GOA/ this page] records past releases; current information can be found in the Last modified field on the [ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/ FTP site]): '''Version released on .''' | ||
* GOA download link: '''[http://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/103.S_flexneri_301.goa Click here to download].''' | * GOA download link: '''[http://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/103.S_flexneri_301.goa Click here to download].''' | ||
| − | * Time taken to import: ''' minutes''' | + | * Time taken to import: '''0.06 minutes''' |
** Note: | ** Note: | ||
Name of .gdb file (give filename and upload and link to compressed file): '''[[ | ]]''' | Name of .gdb file (give filename and upload and link to compressed file): '''[[ | ]]''' | ||
* Time taken to export: ''' ''' | * Time taken to export: ''' ''' | ||
| − | ** Start time: ''' PM PDT''' | + | ** Start time: '''4:30:59 PM PDT''' |
** End time: ''' PM PDT''' | ** End time: ''' PM PDT''' | ||
** Note: | ** Note: | ||
Revision as of 00:27, 9 December 2015
Contents
Export Information
Version of GenMAPP Builder:
- gmbuilder-3.0.0-build-5
Computer on which export was run:
- Front of the room, 3rd computer from the right.
Postgres Database name:
- Shigella_flexneri_20151208
UniProt XML filename (give filename and upload and link to compressed file):
- UniProt XML version (The version information can be found at the UniProt News Page): UniProt release 2015_11
- UniProt XML download link: Click here
- Time taken to import: 4.43 minutes
- Note:
GO OBO-XML filename (give filename and upload and link to compressed file):
- GO OBO-XML version (The version information can be found in the file properties after the file downloaded from the GO Download page has been unzipped): Version created on 11/19/2015 (at 2:24 AM)
- GO OBO-XML download link: Click here to download.
- Time taken to import: 6.84 minutes
- Time taken to process: 5.49 minutes
- Note:
GOA filename (give filename and upload and link to compressed file):
- GOA version (News on this page records past releases; current information can be found in the Last modified field on the FTP site): Version released on .
- GOA download link: Click here to download.
- Time taken to import: 0.06 minutes
- Note:
Name of .gdb file (give filename and upload and link to compressed file): [[ | ]]
- Time taken to export:
- Start time: 4:30:59 PM PDT
- End time: PM PDT
- Note:
Assignment Links
Weekly Assignments
- Week 1
- Week 2
- Week 3
- Week 4
- Week 5
- Week 6
- Week 7
- Week 8
- Week 9
- Week 10
- Week 11
- Week 12
- No Week 13 Assignment
- Week 14
- Week 15
Individual Journal Entries
- Week 1 - This is technically the user page.
- Week 2
- Week 3
- Week 4
- Week 5
- Week 6
- Week 7
- Week 8
- Week 9
- Week 10
- Week 11
- Week 12
- No Week 13 Assignment
- Week 14
- Week 15
