I am very pleased with the results of my work on the V. cholera export (and corresponding edits to GMBuilder), the XMLPipeDB site, and the SchemaSpy documentation. The export and quality assurance performed seemed to indicate that the edits to GMBuilder will allow for future GO OBO-XML files to run smoothly without error, provided another DTD schema change does not occur. However, should one occur in the future, the documentation written should make the process much smoother for future developers. Due to the use of Github, I would say the project was very organized. Tasks and accomplishments were clearly marked, and questions and concerns were generally kept in their relevant threads. The entire process from beginning to end is documented fully on [https://github.com/lmu-bioinformatics/xmlpipedb/issues github's issues], in issues both opened and closed as of the time of this writing. Additionally, all code written and changed can be found in the [https://github.com/lmu-bioinformatics/xmlpipedb github repository] for XMLPipeDB. It is my belief that Github allowed for this project to run very smoothly and for all correspondences to be recorded without confusion.
 
I am very pleased with the results of my work on the V. cholera export (and corresponding edits to GMBuilder), the XMLPipeDB site, and the SchemaSpy documentation. The export and quality assurance performed seemed to indicate that the edits to GMBuilder will allow for future GO OBO-XML files to run smoothly without error, provided another DTD schema change does not occur. However, should one occur in the future, the documentation written should make the process much smoother for future developers. Due to the use of Github, I would say the project was very organized. Tasks and accomplishments were clearly marked, and questions and concerns were generally kept in their relevant threads. The entire process from beginning to end is documented fully on [https://github.com/lmu-bioinformatics/xmlpipedb/issues github's issues], in issues both opened and closed as of the time of this writing. Additionally, all code written and changed can be found in the [https://github.com/lmu-bioinformatics/xmlpipedb github repository] for XMLPipeDB. It is my belief that Github allowed for this project to run very smoothly and for all correspondences to be recorded without confusion.
    +
<!-- Completeness: Did your team achieve all of the project objectives? Why or why not? -->
    
=== Reflection on the Process ===
 
=== Reflection on the Process ===
Exception encountered, of type "Error"
[ad46ae58] /biodb/fall2015/index.php?diff=8275&oldid=8274&title=Nanguiano_Individual_Assessement Error from line 434 of /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php: Call to undefined function each()
Backtrace:
#0 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(544): DiffEngine->diag()
#1 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(344): DiffEngine->compareSeq()
#2 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(227): DiffEngine->diffLocal()
#3 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(721): DiffEngine->diff()
#4 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(859): Diff->__construct()
#5 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(980): MappedDiff->__construct()
#6 /apps/xmlpipedb/biodb/fall2015/includes/diff/TableDiffFormatter.php(194): WordLevelDiff->__construct()
#7 /apps/xmlpipedb/biodb/fall2015/includes/diff/DiffFormatter.php(140): TableDiffFormatter->changed()
#8 /apps/xmlpipedb/biodb/fall2015/includes/diff/DiffFormatter.php(111): DiffFormatter->block()
#9 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(888): DiffFormatter->format()
#10 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(802): DifferenceEngine->generateTextDiffBody()
#11 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(733): DifferenceEngine->generateContentDiffBody()
#12 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(662): DifferenceEngine->getDiffBody()
#13 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(632): DifferenceEngine->getDiff()
#14 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(453): DifferenceEngine->showDiff()
#15 /apps/xmlpipedb/biodb/fall2015/includes/page/Article.php(795): DifferenceEngine->showDiffPage()
#16 /apps/xmlpipedb/biodb/fall2015/includes/page/Article.php(506): Article->showDiffPage()
#17 /apps/xmlpipedb/biodb/fall2015/includes/actions/ViewAction.php(44): Article->view()
#18 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(395): ViewAction->show()
#19 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(273): MediaWiki->performAction()
#20 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(566): MediaWiki->performRequest()
#21 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(414): MediaWiki->main()
#22 /apps/xmlpipedb/biodb/fall2015/index.php(44): MediaWiki->run()
#23 {main}