Difference between revisions of "GENialOMICS Deliverables"
From LMU BioDB 2015
(Added a bunch of deliverables.) |
(→Individual Assessments and Reflections: added reflection) |
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| − | + | [[Image: Genialomics-banner.jpg | center | 1055px]] | |
| + | <br> | ||
| − | * GenMAPP Gene Database for assigned species (''.gdb'') | + | = Group Files and Datasets = |
| − | * ReadMe file to accompany the Gene Database (''.pdf'') | + | |
| − | ** | + | * [[Media:Bc-Std GEN Build4 20151204.zip|GenMAPP Gene Database for assigned species (''.gdb'') (compressed)]] |
| − | * Gene Database Testing Report for final submitted Gene Database (print from wiki to ''.pdf'' file) | + | * [[Media:ReadMe_Bc-Std_GEN_Build4_20151214_final.pdf|ReadMe file to accompany the Gene Database (''.pdf'')]] |
| + | ** [[Media: Genialomics-DatabaseSchema-20151211.pdf|Gene Database Schema Diagram]] | ||
| + | * [[media:GÉNialOMICS_Gene_Database_Testing_Report_(Build_4_Export)_-_LMU_BioDB_2015.pdf|Gene Database Testing Report for final submitted Gene Database (print from wiki to ''.pdf'' file)]] | ||
* [[media:Raw_compiled_data_FINAL_KWVP20151507.xlsx|Processed and analyzed DNA microarray dataset (''.xls'' or ''.xlsx'')]] | * [[media:Raw_compiled_data_FINAL_KWVP20151507.xlsx|Processed and analyzed DNA microarray dataset (''.xls'' or ''.xlsx'')]] | ||
* [[media:For_genMAPP_KWVP20151205.txt|Data file used for import into GenMAPP (''.txt'' or ''.csv'')]] | * [[media:For_genMAPP_KWVP20151205.txt|Data file used for import into GenMAPP (''.txt'' or ''.csv'')]] | ||
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* [[media:For_genMAPP_KWVP20151205.EX.txt|Exceptions file of data imported into GenMAPP (''.EX.txt'')]] | * [[media:For_genMAPP_KWVP20151205.EX.txt|Exceptions file of data imported into GenMAPP (''.EX.txt'')]] | ||
* Raw MAPPFinder results files (''-GO.txt'') | * Raw MAPPFinder results files (''-GO.txt'') | ||
| − | |||
** [[media:KWVP_MAPPfinder_20151208-increase-GO.txt|Increase]] | ** [[media:KWVP_MAPPfinder_20151208-increase-GO.txt|Increase]] | ||
| + | ** [[media:KWVP_MAPPfinder_20151208-decrease-GO.txt|Decrease]] | ||
* [[media:KWVP20151205.gmf|''.gmf'' file]] | * [[media:KWVP20151205.gmf|''.gmf'' file]] | ||
* Filtered MAPPFinder Results (''.xls'' or ''.xlsx'') | * Filtered MAPPFinder Results (''.xls'' or ''.xlsx'') | ||
| − | ** [[KWVP_MAPPfinder_20151208-increase-GO.xlsx|Increase]] | + | ** [[media:KWVP_MAPPfinder_20151208-increase-GO.xlsx|Increase]] |
| − | ** Decrease | + | ** [[media:Vpkwmappfinder20151205-Criterion1-GO-decreased.xlsx|Decrease]] |
| − | * Sample MAPP file of a relevant biological pathway for your species (''.mapp'') | + | *[[media:Oxphosmappkwvp20151212.mapp|Sample MAPP file of a relevant biological pathway for your species (''.mapp'')]] |
| − | * [[ | + | * [[Media:BioDBFinalReport-Genialomics.pdf | Group Report]] |
| − | * | + | * [[Media:Genialomics-BioDBFinalPresentation.pdf|Final PowerPoint presentation]] |
| + | |||
| + | ==Individual Assessments and Reflections== | ||
| + | *[[Media:ReflectionForFinalProject-AV.pdf | Anindita Varshneya]] | ||
| + | *[[Media:KWreflection.pdf | Kevin Wyllie]] | ||
| + | *[[Blitvak Individual Assessment and Reflection| Brandon Litvak]] | ||
| + | *[[Media:Veronica Pacheco.pdf|Veronica Pacheco]] | ||
| + | |||
| + | <br> | ||
| + | |||
| + | {{Template:GÉNialOMICS}} | ||
Latest revision as of 23:49, 18 December 2015
Group Files and Datasets
- GenMAPP Gene Database for assigned species (.gdb) (compressed)
- ReadMe file to accompany the Gene Database (.pdf)
- Gene Database Testing Report for final submitted Gene Database (print from wiki to .pdf file)
- Processed and analyzed DNA microarray dataset (.xls or .xlsx)
- Data file used for import into GenMAPP (.txt or .csv)
- GenMAPP Expression Dataset file (.gex)
- Exceptions file of data imported into GenMAPP (.EX.txt)
- Raw MAPPFinder results files (-GO.txt)
- .gmf file
- Filtered MAPPFinder Results (.xls or .xlsx)
- Sample MAPP file of a relevant biological pathway for your species (.mapp)
- Group Report
- Final PowerPoint presentation
Individual Assessments and Reflections
| Weekly Group Assignments | Shared Group Journals | Project Links | Team Members |
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