Difference between revisions of "Software Configuration"
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== Software and Configuration for PCs in Seaver 120 == | == Software and Configuration for PCs in Seaver 120 == | ||
+ | |||
+ | === Browsers === | ||
* Latest Update for Mozilla FireFox (40.0.2) | * Latest Update for Mozilla FireFox (40.0.2) | ||
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*** Second, check the box next to "Ask where to save each file before downloading" | *** Second, check the box next to "Ask where to save each file before downloading" | ||
:::[[Image:Chrome_Download_Settings.jpg]] | :::[[Image:Chrome_Download_Settings.jpg]] | ||
+ | |||
+ | === Software Required for Final Project === | ||
+ | |||
+ | ==== Required for Gene Database Exports, Quality Assurance, Data Analysis ==== | ||
+ | |||
* PostgreSQL 9.4 (configured to save databases in thawspace, as per Dondi's instructions) | * PostgreSQL 9.4 (configured to save databases in thawspace, as per Dondi's instructions) | ||
** [http://www.enterprisedb.com/products-services-training/pgdownload#windows Download page] | ** [http://www.enterprisedb.com/products-services-training/pgdownload#windows Download page] | ||
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** File to download is: jdk-8u60-windows-x64.exe | ** File to download is: jdk-8u60-windows-x64.exe | ||
** Version 9.20 (2010-11-18) for Windows: 64-bit x64 | ** Version 9.20 (2010-11-18) for Windows: 64-bit x64 | ||
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* GenMAPP 2.1 | * GenMAPP 2.1 | ||
** [https://github.com/GenMAPPCS/genmapp Download page] | ** [https://github.com/GenMAPPCS/genmapp Download page] | ||
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** [http://www.firstobject.com/dn_editor.htm Download page] | ** [http://www.firstobject.com/dn_editor.htm Download page] | ||
** 2.4.2.431 installer (624k) 23-Apr-2011 | ** 2.4.2.431 installer (624k) 23-Apr-2011 | ||
+ | |||
+ | ==== Required for Changes to Code ==== | ||
+ | * Subversion | ||
+ | * Ant | ||
+ | * Eclipse/subclipse | ||
+ | |||
+ | === General Utilities Need for Course === | ||
+ | |||
+ | * 7-zip | ||
+ | ** [http://www.7-zip.org/ Download page] | ||
* PuTTY | * PuTTY | ||
** [http://www.chiark.greenend.org.uk/~sgtatham/putty/download.html Download page]] | ** [http://www.chiark.greenend.org.uk/~sgtatham/putty/download.html Download page]] | ||
** For Windows on Intel x86 putty.exe | ** For Windows on Intel x86 putty.exe | ||
− | |||
=== Run Windows Update === | === Run Windows Update === |
Revision as of 22:55, 21 August 2015
Software and Configuration for PCs in Seaver 120
Browsers
- Latest Update for Mozilla FireFox (40.0.2)
- Options set to default downloads to Desktop and to ask each time a file is downloaded
- Go to the Options menu, General options
- First, under the "Downloads" section, next to "Save files to" click the "Browse" button, select the Desktop, and click the OK button.
- Second, click the radio button next to "Always ask me where to save files"
- Options set to default downloads to Desktop and to ask each time a file is downloaded
- Latest update for Google Chrome (Version 44.0.2403.157 m)
- Options set to default downloads to Desktop and to ask each time a file is downloaded
- Go to Settings page, click on link to "Show advanced settings"
- First, under the "Downloads" section, click the "Change..." button, select the Desktop, and click the OK button.
- Second, check the box next to "Ask where to save each file before downloading"
- Options set to default downloads to Desktop and to ask each time a file is downloaded
Software Required for Final Project
Required for Gene Database Exports, Quality Assurance, Data Analysis
- PostgreSQL 9.4 (configured to save databases in thawspace, as per Dondi's instructions)
- Download page
- Version 9.4.4, Win x86-64
- Java JDK 1.8 64-bit
- Download page
- File to download is: jdk-8u60-windows-x64.exe
- Version 9.20 (2010-11-18) for Windows: 64-bit x64
- GenMAPP 2.1
- Download page
- Installer is "GenMAPPv2Setup.exe"
- Do not check for updates or download databases during installation (server no longer exists)
- Run GenMAPP for the first time to go through the configuration
- Go to Tools > Options > Other, uncheck box for "Automatically check for program updates"
- firstobject XML editor
- Download page
- 2.4.2.431 installer (624k) 23-Apr-2011
Required for Changes to Code
- Subversion
- Ant
- Eclipse/subclipse
General Utilities Need for Course
- 7-zip
- PuTTY
- Download page]
- For Windows on Intel x86 putty.exe
Run Windows Update
Set Windows to View File Extensions
- The Windows 7 operating systems defaults to hiding file extensions. To turn them back on, do the following:
- Go to the Start menu and select "Control Panel".
- In the window that appears, search for "Folder Options" in the search field in the upper right hand corner.
- Click on "Folder Options" in the main window.
- When the Folder Options window appears, click on the View tab.
- Uncheck the box for "Hide extensions for known file types".
- Click the OK button.