Difference between revisions of "Anuvarsh Week 8"
From LMU BioDB 2015
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*[[Media:Merrell_Compiled_Raw_Data_Vibrio_AV_20151015.xls|Part 1 Spreadsheet from Class on 10/15/2015]] | *[[Media:Merrell_Compiled_Raw_Data_Vibrio_AV_20151015.xls|Part 1 Spreadsheet from Class on 10/15/2015]] | ||
*[[Media:Merrell_Compiled_Raw_Data_Vibrio_AV_20151015.txt|Part 2 Text File from Class on 10/20/2015]] | *[[Media:Merrell_Compiled_Raw_Data_Vibrio_AV_20151015.txt|Part 2 Text File from Class on 10/20/2015]] | ||
| + | *[[Media:Merrell_Compiled_Raw_Data_Vibrio_AV_20151015.EX.txt |Exceptions List from Raw Data Conversion on GenMAPP]] | ||
===Reminders=== | ===Reminders=== | ||
*Finish the Sanity Check | *Finish the Sanity Check | ||
*I used the 2010 Vibrio Cholera database | *I used the 2010 Vibrio Cholera database | ||
| + | |||
| + | ===Part 2: GenMAPP=== | ||
| + | *When uploading my tab delimited file to the GenMAPP software for conversion, 121 errors were detected in my raw data. | ||
| + | *My partner, Brandon L., had 772 errors detected in his raw data conversion while using the 2009 Vibrio Cholera database. | ||
| + | **This difference in errors is most likely due to the extensiveness of our databases. Because Brandon was using an older version of the database while I was using a newer version, it is possible that his version had fewer genes than mine. | ||
Revision as of 22:42, 20 October 2015
Electronic Lab Notebook
- Part 1 Spreadsheet from Class on 10/15/2015
- Part 2 Text File from Class on 10/20/2015
- Exceptions List from Raw Data Conversion on GenMAPP
Reminders
- Finish the Sanity Check
- I used the 2010 Vibrio Cholera database
Part 2: GenMAPP
- When uploading my tab delimited file to the GenMAPP software for conversion, 121 errors were detected in my raw data.
- My partner, Brandon L., had 772 errors detected in his raw data conversion while using the 2009 Vibrio Cholera database.
- This difference in errors is most likely due to the extensiveness of our databases. Because Brandon was using an older version of the database while I was using a newer version, it is possible that his version had fewer genes than mine.
