*I allowed the Expression Dataset Manager to convert my data, which was automatically saved with a .gex extension.
 
*I allowed the Expression Dataset Manager to convert my data, which was automatically saved with a .gex extension.
 
*A message appeared saying that the Expression Dataset Manager could not convert one or more lines of data. Lines that generate an error during the conversion of a raw data file are not added to the Expression Dataset. Instead, exception files were created. The exception file was given the same name as my raw data file with .EX before the extension. The exception file contains all of my raw data, with the addition of a column named ~Error~. This column contains the error messages.
 
*A message appeared saying that the Expression Dataset Manager could not convert one or more lines of data. Lines that generate an error during the conversion of a raw data file are not added to the Expression Dataset. Instead, exception files were created. The exception file was given the same name as my raw data file with .EX before the extension. The exception file contains all of my raw data, with the addition of a column named ~Error~. This column contains the error messages.
*Record the number of errors. For your journal assignment, open the .EX.txt file and use the Data > Filter > Autofilter function to determine what the errors were for the rows that were not converted. ‘’’ I got 121 errors. All of the errors were labeled “Gene not found in OrderedLocusNames or any related system.” ‘’’
+
*Record the number of errors. For your journal assignment, open the .EX.txt file and use the Data > Filter > Autofilter function to determine what the errors were for the rows that were not converted. '''I got 121 errors. All of the errors were labeled “Gene not found in OrderedLocusNames or any related system.” '''
*It is likely that you will have a different number of errors than your partner who is using a different version of the Vibrio cholerae Gene Database. Which of you has more errors? Why do you think that is? ‘’’My partner Kristin has more errors, she has 772. A lot of genes must have been added between the time her database was created an mine was, because in the case of the 2010 database, more genes were found in “orderedLocusNames”. ‘’’
+
*It is likely that you will have a different number of errors than your partner who is using a different version of the Vibrio cholerae Gene Database. Which of you has more errors? Why do you think that is? '''My partner Kristin has more errors, she has 772. A lot of genes must have been added between the time her database was created an mine was, because in the case of the 2010 database, more genes were found in “orderedLocusNames”. '''
    
*I uploaded my exceptions file: EX.txt to this wiki page.
 
*I uploaded my exceptions file: EX.txt to this wiki page.
Exception encountered, of type "Error"
[f1ff375c] /biodb/fall2015/index.php?diff=next&oldid=3294&title=Malverso_Week_8 Error from line 434 of /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php: Call to undefined function each()
Backtrace:
#0 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(544): DiffEngine->diag()
#1 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(344): DiffEngine->compareSeq()
#2 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(227): DiffEngine->diffLocal()
#3 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(721): DiffEngine->diff()
#4 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(859): Diff->__construct()
#5 /apps/xmlpipedb/biodb/fall2015/includes/diff/DairikiDiff.php(980): MappedDiff->__construct()
#6 /apps/xmlpipedb/biodb/fall2015/includes/diff/TableDiffFormatter.php(194): WordLevelDiff->__construct()
#7 /apps/xmlpipedb/biodb/fall2015/includes/diff/DiffFormatter.php(140): TableDiffFormatter->changed()
#8 /apps/xmlpipedb/biodb/fall2015/includes/diff/DiffFormatter.php(82): DiffFormatter->block()
#9 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(888): DiffFormatter->format()
#10 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(802): DifferenceEngine->generateTextDiffBody()
#11 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(733): DifferenceEngine->generateContentDiffBody()
#12 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(662): DifferenceEngine->getDiffBody()
#13 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(632): DifferenceEngine->getDiff()
#14 /apps/xmlpipedb/biodb/fall2015/includes/diff/DifferenceEngine.php(453): DifferenceEngine->showDiff()
#15 /apps/xmlpipedb/biodb/fall2015/includes/page/Article.php(795): DifferenceEngine->showDiffPage()
#16 /apps/xmlpipedb/biodb/fall2015/includes/page/Article.php(506): Article->showDiffPage()
#17 /apps/xmlpipedb/biodb/fall2015/includes/actions/ViewAction.php(44): Article->view()
#18 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(395): ViewAction->show()
#19 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(273): MediaWiki->performAction()
#20 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(566): MediaWiki->performRequest()
#21 /apps/xmlpipedb/biodb/fall2015/includes/MediaWiki.php(414): MediaWiki->main()
#22 /apps/xmlpipedb/biodb/fall2015/index.php(44): MediaWiki->run()
#23 {main}