Difference between revisions of "Emilysimso Week 10"
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===Chosen Paper Information=== | ===Chosen Paper Information=== | ||
*APA citation: Heidelberg, J. F., Paulsen, I. T., Nelson, K. E., Gaidos, E. J., Nelson, W. C., Read, T. D., ... & Fraser, C. M. (2002). Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis. Nature biotechnology, 20(11), 1118-1123. | *APA citation: Heidelberg, J. F., Paulsen, I. T., Nelson, K. E., Gaidos, E. J., Nelson, W. C., Read, T. D., ... & Fraser, C. M. (2002). Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis. Nature biotechnology, 20(11), 1118-1123. | ||
| − | *PubMed | + | *PubMed [http://www.ncbi.nlm.nih.gov/pubmed/?term=Genome+sequence+of+the+dissimilatory+metal+ion%E2%80%93reducing+bacterium+Shewanella+oneidensis | abstract] |
*PubMedCentral article: | *PubMedCentral article: | ||
| − | *Full text from publisher | + | *Full text from publisher [http://www.nature.com/nbt/journal/v20/n11/full/nbt749.html | website] |
| − | *PDF file from publisher | + | *PDF file from publisher [http://www.nature.com/nbt/journal/v20/n11/pdf/nbt749.pdf | website] |
*Article rights: | *Article rights: | ||
*Publishing organization of article: | *Publishing organization of article: | ||
Revision as of 23:29, 5 November 2015
In Class Notes - what you need for annotated bibliography
- Genome Sequence paper - find the best one (not for a subspecies)
- Microarray data paper - data that will be analyzed
- 1-2 papers per group member on species (will rank on group page on which to focus on)\
Electronic lab notebook - details the search for these papers
Individual page - annotate bibliography
Teams page - copy genome paper and create ranked list
Use APA style to cite, make sure to translate into wiki text
DOI = primary ID for an article (digital object identifier)
Contents
Genome Sequence Paper
PubMed
- First keyword search: Shewanella Oneidensis genome sequence, 128 results from PubMed
- Second search: Shewanella Oneidensis in Genome, there were 5 publications
- Advanced search: Shewanella Oneidensis genome (in Title/Abstract section), 3 results
Google Scholar
- First search: Shewanella Oneidensis genome sequence, 7,450 results
- Second search: Shewanella Oneidensis complete genome sequence, 6,460 results
- Removed patents, had 6,220 results
Web of Science
- First search: Shewanella Oneidensis genome, 441 results
- Refined by selecting just articles, got 262 results
Chosen Paper Information
- APA citation: Heidelberg, J. F., Paulsen, I. T., Nelson, K. E., Gaidos, E. J., Nelson, W. C., Read, T. D., ... & Fraser, C. M. (2002). Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis. Nature biotechnology, 20(11), 1118-1123.
- PubMed | abstract
- PubMedCentral article:
- Full text from publisher | website
- PDF file from publisher | website
- Article rights:
- Publishing organization of article:
- Print or online only:
- Has LMU paid subscription:
Microarray
- Browsed all of ArrayExpress
- Filtered search results: Shewanella oneidensis, RNA assay, Array assay, All arrays
- Had 20 experiments
- Look for transcription profiling by array
- Want a large assay number
