Difference between revisions of "GENialOMICS"

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(added work status table -- needs to reformatted to have names across columns and goals/progress down rows)
(Week 10: removed week 11 information)
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*On November 3, 2015, GÉNialOMICS chose to create database for ''Burkholderia cenocepacia''.
 
*On November 3, 2015, GÉNialOMICS chose to create database for ''Burkholderia cenocepacia''.
 
*On November 5, 2015, a journal detailing the complete genome of ''Burkholderia cenocepacia'' (strain J2315) titled [http://jb.asm.org/content/191/1/261.short The Genome of Burkholderia cenocepacia J2315, an Epidemic Pathogen of Cystic Fibrosis Patients]  was found.
 
*On November 5, 2015, a journal detailing the complete genome of ''Burkholderia cenocepacia'' (strain J2315) titled [http://jb.asm.org/content/191/1/261.short The Genome of Burkholderia cenocepacia J2315, an Epidemic Pathogen of Cystic Fibrosis Patients]  was found.
* Also on November 10, 2015, a journal using the ''B. cenocepacia'' genome in a microarray experiment titled [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3596321/ Biofilm-Grown ''Burkholderia cepacia'' Complex Cells Survive Antibiotic Treatment by Avoiding Production of Reactive Oxygen Species] was identified and selected for analysis.
 
 
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Revision as of 23:54, 12 November 2015

Genialomics-banner.jpg


Weekly Group Assignments Shared Group Journals Project Links Team Members


Week 10


Weel 11

Weekly Goals and Progress
Anu Varshneya Goals
  • Complete journal club individual assignment
  • Create and practice journal club presentation with Brandon
  • Find a MOD
  • Create project timeline with soft deadlines for each person/milestone
  • Complete milestone 0: Working Environment Setup
  • Complete milestone 1: Version Control Setup
  • Begin milestone 2: “Developer Rig” Setup and Initial As-Is Build
  • Reformat Home Page with Dr. Dahlquists recommendations
Progress
Brandon Litvak Goals
Progress
Veronica Pacheco Goals

Work with Kevin Wyllie

  • Understand experimental design
  • Understand sample-data relationship
    • raw.zip and .sdrf
    • Construct sample-data diagram
  • Develop compiled raw data file
Progress
Kevin Wyllie Goals

Work with Veronica Pacheco

  • Understand experimental design
  • Understand sample-data relationship
    • raw.zip and .sdrf
    • Construct sample-data diagram
  • Develop compiled raw data file
Progress

Other Progress: