Difference between revisions of "Troque Week 14"

Revision as of 01:22, 4 December 2015

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Name of .gdb file (give filename and upload and link to compressed file): Sf-Std_20151201.gdb

Time taken to export:
- Start time: 4:19:22 PM PDT
- End time: 8:30:08 PM PDT
- Note:

(CP|SF?)([0-9][0-9][0-9][0-9])(\.[0-9])?(/|</name>)
Observations:
- In order to lessen the number of matches, we had to add the end tag "</name>" to our regular expression. This brought down the number of matches from over 8000, to just 7517. Since TallyEngine's results were 7567, this means that 150 IDs were not being caught. In order to account for this, we had to add the genes with ID's of the form CP#### (there were 50 instances of these), and those with the form SF####.# or S####.#. This led us to get 7566 gene IDs.
When I looked at the IDs in Microsoft Access, the IDs total 7569. In order to account for this last piece of gene formatting, we also had to account for the genes with the form SF?####/SF?####.

@@ Line 13: / Line 13: @@
 == Regular Expression ==
 * (CP|SF?)([0-9][0-9][0-9][0-9])(\.[0-9])?(/|</name>)
+* Observations:
+** In order to lessen the number of matches, we had to add the end tag "</name>" to our regular expression. This brought down the number of matches from over 8000, to just 7517. Since TallyEngine's results were 7567, this means that 150 IDs were not being caught. In order to account for this, we had to add the genes with ID's of the form CP#### (there were 50 instances of these), and those with the form SF####.# or S####.#. This led us to get 7566 gene IDs.
+* When I looked at the IDs in Microsoft Access, the IDs total 7569. In order to account for this last piece of gene formatting, we also had to account for the genes with the form SF?####/SF?####.
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