Difference between revisions of "Bordetella Pertussis GenMAPP Analysis Deliverables"

Revision as of 07:33, 14 December 2015

GenMAPP Gene Database for assigned species (.gdb): File:Bpertussis-std cw20151210.zip
ReadMe file to accompany the Gene Database (.pdf)
- Sample ReadMe in Word format: ReadMe_Vc-Std_External_20131122.zip
- Sample ReadMe in markdown (a work in progress)
- Include Gene Database Schema diagram in ReadMe
  - Sample schema in Adobe Illustrator format: Vibrio_schema_20101022.zip
Gene Database Testing Report for final submitted Gene Database (print from wiki to .pdf file)
Processed and analyzed DNA microarray dataset (.xls or .xlsx): File:Bpertussis compiledrawdata cw20151208.xlsx
Data file used for import into GenMAPP (.txt or .csv): File:Bpertussis compiledrawdata cw20151208.txt
GenMAPP Expression Dataset file (.gex): File:Bpertussis expressiondataset cw20151213.gex
Exceptions file of data imported into GenMAPP (.EX.txt): File:Bpertussis expressiondataset exceptions cw20151213.EX.txt
Raw MAPPFinder results files (-GO.txt)
.gmf file
Filtered MAPPFinder Results (.xls or .xlsx)
Sample MAPP file of a relevant biological pathway for your species (.mapp)
Group Report describing the creation of the Gene Database and the biological analysis of the data (.doc, .docx, or .pdf)
PowerPoint presentation (.ppt, .pptx, or .pdf, given on Tuesday, December 15)

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 * Data file used for import into GenMAPP (''.txt'' or ''.csv''): [[File:Bpertussis compiledrawdata cw20151208.txt]]
 * GenMAPP Expression Dataset file (''.gex''): [[File:Bpertussis expressiondataset cw20151213.gex]]
-* Exceptions file of data imported into GenMAPP (''.EX.txt'')
+* Exceptions file of data imported into GenMAPP (''.EX.txt''): [[File:Bpertussis expressiondataset exceptions cw20151213.EX.txt]]
 * Raw MAPPFinder results files (''-GO.txt'')
 * ''.gmf'' file