Difference between revisions of "Emilysimso Week 8"
From LMU BioDB 2015
Emilysimso (Talk | contribs) (Notes after first work day (accidentally in week 7 assign), added file) |
Emilysimso (Talk | contribs) (Additions from 10/20 workday) |
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* File after work day on October 15, 2015 - [[File:Copy of Merrell Compiled Raw Data Vibrio ES 20151015.xls]] | * File after work day on October 15, 2015 - [[File:Copy of Merrell Compiled Raw Data Vibrio ES 20151015.xls]] | ||
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| + | * Xcel file after work day on October 20, 2015 - [[File:Copy of Merrell Compiled Raw Data Vibrio ES 20151020.xls]] | ||
| + | * .txt. file after work day on October 20, 2015 - [[File:Copy of Merrell Compiled Raw Data Vibrio ES 20151020.txt]] | ||
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| + | * 99 genes have a P value < 0.05 | ||
| + | * 19 genes have a P value < 0.01 | ||
| + | * 1 gene has a P value < 0.001 | ||
| + | * No genes have a P value < 0.0001 | ||
| + | * These values do not match with known values given in instructions from Part 1 | ||
| + | |||
| + | * Used the 2009 database | ||
| + | ** There were 772 errors in this data | ||
| + | ** Here is the file EX.txt - [[File:Copy of Merrell Compiled Raw Data Vibrio ES 20151020.EX.txt]] | ||
Revision as of 22:44, 20 October 2015
Part One
- Opened up the spreadsheet for the first time
- Taken from Sample Minds Part 1
- Scaled and centered the data
- It was important to always reference back to the same rows using a dollar sign symbol attached to B2 and B3 (becoming B2$ and B2$) because we want to always compare the other call to these numerical values.
- Performed statistical analysis on the data (averages, StdDev, Tstat, Pvalue, Bonferroni Pvalue)
- File after work day on October 15, 2015 - File:Copy of Merrell Compiled Raw Data Vibrio ES 20151015.xls
- Xcel file after work day on October 20, 2015 - File:Copy of Merrell Compiled Raw Data Vibrio ES 20151020.xls
- .txt. file after work day on October 20, 2015 - File:Copy of Merrell Compiled Raw Data Vibrio ES 20151020.txt
- 99 genes have a P value < 0.05
- 19 genes have a P value < 0.01
- 1 gene has a P value < 0.001
- No genes have a P value < 0.0001
- These values do not match with known values given in instructions from Part 1
- Used the 2009 database
- There were 772 errors in this data
- Here is the file EX.txt - File:Copy of Merrell Compiled Raw Data Vibrio ES 20151020.EX.txt
