Difference between revisions of "Gene Database Testing Report- cw20151203"
From LMU BioDB 2015
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| − | + | ==Gene Database Testing Report== | |
| − | + | ===Export Information=== | |
| + | |||
| + | Version of GenMAPP Builder: Version 3.0.0 Build 5 - cw20151203 | ||
| + | |||
| + | Computer on which export was run: Seaver 120- Last computer on the right in the row farthest from the front of the room | ||
| + | |||
| + | Postgres Database name: bpertussis_cw20151201_gmb3build5 | ||
| + | |||
| + | UniProt XML filename: [[File:Uniprot-proteome-UP000002676 cw20151201.zip]] | ||
| + | * UniProt XML version (The version information was found at [http://uniprot.org/news the UniProt News Page]): 2015_11 | ||
| + | * UniProt XML download link: [http://www.uniprot.org/proteomes/UP000002676 Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)] | ||
| + | * Time taken to import: 2.59 minutes | ||
| + | ** Note: The import time was nearly equivalent to that when creating the previous "Bordetella pertussis" gene database: bpertussis-std_cw20151119.gdb (2.60 minute). No interruptions occurred during this process. | ||
| + | |||
| + | GO OBO-XML filename: [[File:Go daily-termdb cw20151201.zip]] | ||
| + | * GO OBO-XML version (The version information was found in the file properties): Last Modified- December 01, 2015, 2:21:31 AM | ||
| + | * GO OBO-XML download link: [http://geneontology.org/page/download-ontology#Legacy_Downloads Gene Ontology legacy download page] | ||
| + | * Time taken to import: 7.08 minutes | ||
| + | * Time taken to process: 4.42 minutes | ||
| + | ** Note: The import and processing times were similar to those for the previous "Bordetella pertussis" gene database: bpertussis-std_cw20151119.gdb (6.99 minutes and 4.48 minutes respectively). No interruptions occurred during these processes. | ||
| + | |||
| + | GOA filename: [[File:145.B pertussis ATCC BAA-589 cw20151201.zip]] | ||
| + | * GOA version (found in the Last modified field on the [ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/ FTP site]): Last Modified- 11/10/15 1:39:00 PM | ||
| + | * GOA download link: [http://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/145.B_pertussis_ATCC_BAA-589.goa for ''Bordetella pertussis'' strain Tohama I] | ||
| + | * Time taken to import: 0.04 minutes | ||
| + | ** Note: The import time was equal to that of the previous "Bordetella pertussis" gene database: bpertussis-std_cw20151119.gdb. No interruptions occurred during this process. | ||
| + | |||
| + | Name of .gdb file: [[]] | ||
| + | * Time taken to export: | ||
| + | ** Start time: 4:02 PM | ||
| + | ** End time: | ||
| + | ** Elapsed time: | ||
| + | Note: | ||
| + | |||
| + | [[Category: Class Whoopers]] | ||
Revision as of 00:15, 4 December 2015
Gene Database Testing Report
Export Information
Version of GenMAPP Builder: Version 3.0.0 Build 5 - cw20151203
Computer on which export was run: Seaver 120- Last computer on the right in the row farthest from the front of the room
Postgres Database name: bpertussis_cw20151201_gmb3build5
UniProt XML filename: File:Uniprot-proteome-UP000002676 cw20151201.zip
- UniProt XML version (The version information was found at the UniProt News Page): 2015_11
- UniProt XML download link: Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
- Time taken to import: 2.59 minutes
- Note: The import time was nearly equivalent to that when creating the previous "Bordetella pertussis" gene database: bpertussis-std_cw20151119.gdb (2.60 minute). No interruptions occurred during this process.
GO OBO-XML filename: File:Go daily-termdb cw20151201.zip
- GO OBO-XML version (The version information was found in the file properties): Last Modified- December 01, 2015, 2:21:31 AM
- GO OBO-XML download link: Gene Ontology legacy download page
- Time taken to import: 7.08 minutes
- Time taken to process: 4.42 minutes
- Note: The import and processing times were similar to those for the previous "Bordetella pertussis" gene database: bpertussis-std_cw20151119.gdb (6.99 minutes and 4.48 minutes respectively). No interruptions occurred during these processes.
GOA filename: File:145.B pertussis ATCC BAA-589 cw20151201.zip
- GOA version (found in the Last modified field on the FTP site): Last Modified- 11/10/15 1:39:00 PM
- GOA download link: for Bordetella pertussis strain Tohama I
- Time taken to import: 0.04 minutes
- Note: The import time was equal to that of the previous "Bordetella pertussis" gene database: bpertussis-std_cw20151119.gdb. No interruptions occurred during this process.
Name of .gdb file: [[]]
- Time taken to export:
- Start time: 4:02 PM
- End time:
- Elapsed time:
Note:
